Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Gm15003-201ENSMUST00000118884 446 ntBASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Gm11422-201ENSMUST00000118925 1103 ntBASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Gm12453-201ENSMUST00000121981 331 ntBASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Gm11942-201ENSMUST00000180255 345 ntBASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Gm44158-201ENSMUST00000203881 505 ntBASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col25a1Q99MQ5 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.77□□□□□ -0.36
Col25a1Q99MQ5 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col25a1Q99MQ5 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col25a1Q99MQ5 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col25a1Q99MQ5 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col25a1Q99MQ5 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col25a1Q99MQ5 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col25a1Q99MQ5 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col25a1Q99MQ5 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col25a1Q99MQ5 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col25a1Q99MQ5 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Col25a1Q99MQ5 Gm22594-201ENSMUST00000104251 130 ntBASIC12.77□□□□□ -0.37
Col25a1Q99MQ5 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Col25a1Q99MQ5 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Col25a1Q99MQ5 Gm14644-201ENSMUST00000116671 647 ntBASIC12.77□□□□□ -0.37
Col25a1Q99MQ5 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC12.77□□□□□ -0.37
Col25a1Q99MQ5 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.77□□□□□ -0.37
Col25a1Q99MQ5 Gm23363-201ENSMUST00000175024 79 ntBASIC12.77□□□□□ -0.37
Col25a1Q99MQ5 Gm17798-201ENSMUST00000182282 1035 ntBASIC12.77□□□□□ -0.37
Col25a1Q99MQ5 Gm8756-201ENSMUST00000183250 929 ntBASIC12.77□□□□□ -0.37
Col25a1Q99MQ5 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.77□□□□□ -0.37
Col25a1Q99MQ5 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Col25a1Q99MQ5 BC106175-202ENSMUST00000219344 1213 ntBASIC12.77□□□□□ -0.37
Col25a1Q99MQ5 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.77□□□□□ -0.37
Col25a1Q99MQ5 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col25a1Q99MQ5 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col25a1Q99MQ5 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col25a1Q99MQ5 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Col25a1Q99MQ5 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Col25a1Q99MQ5 Gm5641-201ENSMUST00000091130 1488 ntBASIC12.77□□□□□ -0.37
Col25a1Q99MQ5 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col25a1Q99MQ5 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col25a1Q99MQ5 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col25a1Q99MQ5 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Col25a1Q99MQ5 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col25a1Q99MQ5 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col25a1Q99MQ5 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Gm23596-201ENSMUST00000104304 132 ntBASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Gm10731-201ENSMUST00000181171 448 ntBASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Gm29304-201ENSMUST00000186555 695 ntBASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Gm8531-201ENSMUST00000188319 893 ntBASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Gm29223-201ENSMUST00000188867 695 ntBASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms