Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Gm23912-201ENSMUST00000104687 87 ntBASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Gm11531-201ENSMUST00000117614 555 ntBASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Gm13297-201ENSMUST00000120205 934 ntBASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Gm14832-201ENSMUST00000121289 322 ntBASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Gm10608-202ENSMUST00000213924 676 ntBASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Gm10478-201ENSMUST00000084451 396 ntBASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.78□□□□□ -0.36
Pcdhb1Q91Y08 Cog3-203ENSMUST00000227473 4197 ntBASIC12.77□□□□□ -0.36
Pcdhb1Q91Y08 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb1Q91Y08 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Pcdhb1Q91Y08 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb1Q91Y08 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb1Q91Y08 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb1Q91Y08 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb1Q91Y08 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb1Q91Y08 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb1Q91Y08 Gm24845-201ENSMUST00000158034 109 ntBASIC12.77□□□□□ -0.37
Pcdhb1Q91Y08 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb1Q91Y08 Gm45331-201ENSMUST00000209868 554 ntBASIC12.77□□□□□ -0.37
Pcdhb1Q91Y08 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.77□□□□□ -0.37
Pcdhb1Q91Y08 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.77□□□□□ -0.37
Pcdhb1Q91Y08 Gm6013-201ENSMUST00000212264 699 ntBASIC12.77□□□□□ -0.37
Pcdhb1Q91Y08 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pcdhb1Q91Y08 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb1Q91Y08 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb1Q91Y08 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb1Q91Y08 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb1Q91Y08 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb1Q91Y08 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb1Q91Y08 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pcdhb1Q91Y08 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.77□□□□□ -0.37
Pcdhb1Q91Y08 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb1Q91Y08 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Pcdhb1Q91Y08 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb1Q91Y08 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pcdhb1Q91Y08 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb1Q91Y08 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb1Q91Y08 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pcdhb1Q91Y08 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb1Q91Y08 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pcdhb1Q91Y08 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Gm25214-201ENSMUST00000104573 129 ntBASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms