Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 Gm23363-201ENSMUST00000175024 79 ntBASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 Mir6958-201ENSMUST00000184207 73 ntBASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 Gm9540-201ENSMUST00000188230 478 ntBASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 Gm7003-201ENSMUST00000195089 312 ntBASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga6Q91XY2 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Gm6963-201ENSMUST00000147879 379 ntBASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Gm9555-201ENSMUST00000200908 583 ntBASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Gm8285-201ENSMUST00000208293 759 ntBASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga6Q91XY2 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga6Q91XY2 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms