Protein–RNA interactions for Protein: P97458

Prop1, Homeobox protein prophet of Pit-1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prop1P97458 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Prop1P97458 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Prop1P97458 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Prop1P97458 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Prop1P97458 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Prop1P97458 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Prop1P97458 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Prop1P97458 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Prop1P97458 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Prop1P97458 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Prop1P97458 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Prop1P97458 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Prop1P97458 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Prop1P97458 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Prop1P97458 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Prop1P97458 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Prop1P97458 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Prop1P97458 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Prop1P97458 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.35□□□□□ -0.75
Prop1P97458 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.35□□□□□ -0.75
Prop1P97458 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Prop1P97458 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Prop1P97458 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Prop1P97458 Gm23912-201ENSMUST00000104687 87 ntBASIC10.35□□□□□ -0.75
Prop1P97458 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Prop1P97458 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Prop1P97458 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Prop1P97458 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC10.35□□□□□ -0.75
Prop1P97458 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Prop1P97458 Gm43962-201ENSMUST00000203898 190 ntBASIC10.35□□□□□ -0.75
Prop1P97458 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Prop1P97458 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Prop1P97458 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.35□□□□□ -0.75
Prop1P97458 CT025694.1-201ENSMUST00000226188 934 ntBASIC10.35□□□□□ -0.75
Prop1P97458 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Prop1P97458 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Prop1P97458 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Prop1P97458 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Prop1P97458 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Prop1P97458 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.35□□□□□ -0.75
Prop1P97458 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Prop1P97458 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.35□□□□□ -0.75
Prop1P97458 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Prop1P97458 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.35□□□□□ -0.75
Prop1P97458 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Prop1P97458 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Prop1P97458 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.34□□□□□ -0.75
Prop1P97458 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Prop1P97458 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.34□□□□□ -0.75
Prop1P97458 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Prop1P97458 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Prop1P97458 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Prop1P97458 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Prop1P97458 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Prop1P97458 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.34□□□□□ -0.75
Prop1P97458 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Prop1P97458 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Prop1P97458 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Prop1P97458 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Prop1P97458 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Prop1P97458 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Prop1P97458 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Prop1P97458 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Prop1P97458 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.34□□□□□ -0.75
Prop1P97458 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Prop1P97458 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Prop1P97458 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Prop1P97458 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Prop1P97458 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Prop1P97458 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.34□□□□□ -0.75
Prop1P97458 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Prop1P97458 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Prop1P97458 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Prop1P97458 Gm22133-201ENSMUST00000102082 109 ntBASIC10.34□□□□□ -0.75
Prop1P97458 Gm12164-201ENSMUST00000121695 551 ntBASIC10.34□□□□□ -0.75
Prop1P97458 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC10.34□□□□□ -0.75
Prop1P97458 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Prop1P97458 Gm17040-202ENSMUST00000170597 889 ntBASIC10.34□□□□□ -0.75
Prop1P97458 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.34□□□□□ -0.75
Prop1P97458 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC10.34□□□□□ -0.75
Prop1P97458 Gm43068-201ENSMUST00000201095 1273 ntBASIC10.34□□□□□ -0.75
Prop1P97458 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Prop1P97458 Gm19208-201ENSMUST00000213861 912 ntBASIC10.34□□□□□ -0.75
Prop1P97458 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.34□□□□□ -0.75
Prop1P97458 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Prop1P97458 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Prop1P97458 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Prop1P97458 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Prop1P97458 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Prop1P97458 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.34□□□□□ -0.75
Prop1P97458 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Prop1P97458 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Prop1P97458 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Prop1P97458 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Prop1P97458 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Prop1P97458 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Prop1P97458 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Prop1P97458 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Prop1P97458 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Prop1P97458 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms