Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps45P97390 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps45P97390 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps45P97390 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.76□□□□□ -0.37
Vps45P97390 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps45P97390 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps45P97390 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps45P97390 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps45P97390 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps45P97390 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Vps45P97390 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps45P97390 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps45P97390 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps45P97390 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps45P97390 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps45P97390 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Vps45P97390 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.75□□□□□ -0.37
Vps45P97390 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.75□□□□□ -0.37
Vps45P97390 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps45P97390 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps45P97390 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps45P97390 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps45P97390 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps45P97390 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.75□□□□□ -0.37
Vps45P97390 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.75□□□□□ -0.37
Vps45P97390 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps45P97390 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps45P97390 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps45P97390 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
Vps45P97390 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps45P97390 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps45P97390 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps45P97390 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.75□□□□□ -0.37
Vps45P97390 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps45P97390 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps45P97390 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.75□□□□□ -0.37
Vps45P97390 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.75□□□□□ -0.37
Vps45P97390 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Vps45P97390 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.75□□□□□ -0.37
Vps45P97390 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps45P97390 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps45P97390 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.75□□□□□ -0.37
Vps45P97390 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps45P97390 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.75□□□□□ -0.37
Vps45P97390 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps45P97390 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps45P97390 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps45P97390 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.75□□□□□ -0.37
Vps45P97390 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps45P97390 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps45P97390 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps45P97390 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps45P97390 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps45P97390 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps45P97390 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps45P97390 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps45P97390 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps45P97390 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps45P97390 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Vps45P97390 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps45P97390 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps45P97390 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.74□□□□□ -0.37
Vps45P97390 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps45P97390 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps45P97390 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps45P97390 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps45P97390 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.74□□□□□ -0.37
Vps45P97390 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Vps45P97390 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps45P97390 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps45P97390 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps45P97390 Gm11930-201ENSMUST00000117788 190 ntBASIC12.74□□□□□ -0.37
Vps45P97390 Gm11331-201ENSMUST00000119764 288 ntBASIC12.74□□□□□ -0.37
Vps45P97390 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.74□□□□□ -0.37
Vps45P97390 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Vps45P97390 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps45P97390 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.74□□□□□ -0.37
Vps45P97390 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.74□□□□□ -0.37
Vps45P97390 Gm23119-201ENSMUST00000158610 140 ntBASIC12.74□□□□□ -0.37
Vps45P97390 Gm18304-201ENSMUST00000189162 546 ntBASIC12.74□□□□□ -0.37
Vps45P97390 AA914427-201ENSMUST00000193194 1166 ntBASIC12.74□□□□□ -0.37
Vps45P97390 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.74□□□□□ -0.37
Vps45P97390 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.74□□□□□ -0.37
Vps45P97390 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps45P97390 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.74□□□□□ -0.37
Vps45P97390 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.74□□□□□ -0.37
Vps45P97390 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps45P97390 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps45P97390 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps45P97390 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps45P97390 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps45P97390 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps45P97390 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps45P97390 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps45P97390 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps45P97390 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps45P97390 Pck2-205ENSMUST00000226352 2784 ntBASIC12.74□□□□□ -0.37
Vps45P97390 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps45P97390 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps45P97390 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms