Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Atxn1P54254 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Atxn1P54254 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Atxn1P54254 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Atxn1P54254 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atxn1P54254 Gm23153-201ENSMUST00000175323 313 ntBASIC12.25□□□□□ -0.45
Atxn1P54254 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atxn1P54254 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.25□□□□□ -0.45
Atxn1P54254 AY036118-201ENSMUST00000200021 923 ntBASIC12.25□□□□□ -0.45
Atxn1P54254 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.25□□□□□ -0.45
Atxn1P54254 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.25□□□□□ -0.45
Atxn1P54254 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.25□□□□□ -0.45
Atxn1P54254 Gm1821-202ENSMUST00000227415 750 ntBASIC12.25□□□□□ -0.45
Atxn1P54254 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atxn1P54254 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.25□□□□□ -0.45
Atxn1P54254 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.25□□□□□ -0.45
Atxn1P54254 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Atxn1P54254 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atxn1P54254 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atxn1P54254 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atxn1P54254 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atxn1P54254 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.25□□□□□ -0.45
Atxn1P54254 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atxn1P54254 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.25□□□□□ -0.45
Atxn1P54254 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atxn1P54254 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atxn1P54254 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.25□□□□□ -0.45
Atxn1P54254 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atxn1P54254 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atxn1P54254 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atxn1P54254 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
Atxn1P54254 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atxn1P54254 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atxn1P54254 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atxn1P54254 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.24□□□□□ -0.45
Atxn1P54254 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atxn1P54254 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atxn1P54254 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atxn1P54254 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atxn1P54254 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.24□□□□□ -0.45
Atxn1P54254 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atxn1P54254 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Atxn1P54254 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Atxn1P54254 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atxn1P54254 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Atxn1P54254 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Atxn1P54254 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Atxn1P54254 Gm14832-201ENSMUST00000121289 322 ntBASIC12.24□□□□□ -0.45
Atxn1P54254 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Atxn1P54254 Rmrp-201ENSMUST00000157463 271 ntBASIC12.24□□□□□ -0.45
Atxn1P54254 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Atxn1P54254 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Atxn1P54254 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Atxn1P54254 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atxn1P54254 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Atxn1P54254 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.24□□□□□ -0.45
Atxn1P54254 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Atxn1P54254 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Atxn1P54254 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Atxn1P54254 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.24□□□□□ -0.45
Atxn1P54254 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.24□□□□□ -0.45
Atxn1P54254 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atxn1P54254 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Atxn1P54254 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atxn1P54254 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atxn1P54254 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atxn1P54254 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atxn1P54254 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atxn1P54254 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Atxn1P54254 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atxn1P54254 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Atxn1P54254 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atxn1P54254 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atxn1P54254 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atxn1P54254 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Atxn1P54254 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atxn1P54254 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atxn1P54254 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Atxn1P54254 Gm37648-201ENSMUST00000192072 2563 ntBASIC12.24□□□□□ -0.45
Atxn1P54254 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atxn1P54254 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Atxn1P54254 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atxn1P54254 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atxn1P54254 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atxn1P54254 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atxn1P54254 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atxn1P54254 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Atxn1P54254 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atxn1P54254 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atxn1P54254 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atxn1P54254 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atxn1P54254 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atxn1P54254 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Atxn1P54254 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Atxn1P54254 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atxn1P54254 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Atxn1P54254 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Atxn1P54254 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Atxn1P54254 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.23□□□□□ -0.45
Atxn1P54254 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms