Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Pcdh1F7BJK1 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Gm23119-201ENSMUST00000158610 140 ntBASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Gm10146-201ENSMUST00000072739 309 ntBASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh1F7BJK1 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Mir1894-201ENSMUST00000122802 81 ntBASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Gm4034-201ENSMUST00000187674 480 ntBASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Gm19163-201ENSMUST00000223313 780 ntBASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms