Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Gm37307-201ENSMUST00000193663 2621 ntBASIC13.44□□□□□ -0.26
Gtf2a1Q99PM3 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gtf2a1Q99PM3 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Gtf2a1Q99PM3 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gtf2a1Q99PM3 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gtf2a1Q99PM3 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Gtf2a1Q99PM3 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.44□□□□□ -0.26
Gtf2a1Q99PM3 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Gtf2a1Q99PM3 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Gtf2a1Q99PM3 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gtf2a1Q99PM3 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gtf2a1Q99PM3 P2ry14-206ENSMUST00000197841 2476 ntTSL 5 BASIC13.44□□□□□ -0.26
Gtf2a1Q99PM3 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Gm12895-201ENSMUST00000122214 226 ntBASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Sh2d7-201ENSMUST00000060242 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gtf2a1Q99PM3 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Gm11780-201ENSMUST00000136880 516 ntBASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Mcf2-204ENSMUST00000228150 3336 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Gm42741-201ENSMUST00000201340 2278 ntBASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Gtf2a1Q99PM3 AC115746.1-201ENSMUST00000228949 3617 ntBASIC13.41□□□□□ -0.26
Gtf2a1Q99PM3 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gtf2a1Q99PM3 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.41□□□□□ -0.26
Gtf2a1Q99PM3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Gtf2a1Q99PM3 Tmem74bos-202ENSMUST00000149319 2090 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Gtf2a1Q99PM3 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC13.41□□□□□ -0.26
Gtf2a1Q99PM3 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gtf2a1Q99PM3 Bcl2-202ENSMUST00000189999 2841 ntBASIC13.41□□□□□ -0.26
Gtf2a1Q99PM3 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gtf2a1Q99PM3 Gpm6b-204ENSMUST00000112226 3174 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gtf2a1Q99PM3 AC156802.2-203ENSMUST00000226032 1906 ntBASIC13.41□□□□□ -0.26
Gtf2a1Q99PM3 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms