Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp44Q8C2S0 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp44Q8C2S0 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp44Q8C2S0 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp44Q8C2S0 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp44Q8C2S0 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.4□□□□□ -0.1
Usp44Q8C2S0 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp44Q8C2S0 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp44Q8C2S0 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Usp44Q8C2S0 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Usp44Q8C2S0 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Gm19692-201ENSMUST00000203856 2084 ntBASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Gm14381-201ENSMUST00000122105 414 ntBASIC14.39□□□□□ -0.11
Usp44Q8C2S0 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Gm20482-202ENSMUST00000174729 825 ntBASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Gm9230-201ENSMUST00000188228 532 ntBASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Gm38317-201ENSMUST00000195564 343 ntBASIC14.39□□□□□ -0.11
Usp44Q8C2S0 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Gzmn-202ENSMUST00000225535 989 ntBASIC14.39□□□□□ -0.11
Usp44Q8C2S0 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Map1b-203ENSMUST00000223725 2669 ntBASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp44Q8C2S0 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Gm5706-201ENSMUST00000181525 993 ntBASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Gm13097-201ENSMUST00000210722 397 ntBASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.38□□□□□ -0.11
Usp44Q8C2S0 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp44Q8C2S0 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp44Q8C2S0 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp44Q8C2S0 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp44Q8C2S0 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp44Q8C2S0 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.37□□□□□ -0.11
Usp44Q8C2S0 AC154517.2-201ENSMUST00000220829 2458 ntBASIC14.37□□□□□ -0.11
Usp44Q8C2S0 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.37□□□□□ -0.11
Usp44Q8C2S0 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Usp44Q8C2S0 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms