Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cacna1eQ61290 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.04□□□□□ -0.48
Cacna1eQ61290 Gm9463-201ENSMUST00000206707 601 ntBASIC12.04□□□□□ -0.48
Cacna1eQ61290 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.04□□□□□ -0.48
Cacna1eQ61290 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cacna1eQ61290 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.04□□□□□ -0.48
Cacna1eQ61290 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cacna1eQ61290 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Gm43520-201ENSMUST00000197996 164 ntBASIC12.04□□□□□ -0.48
Cacna1eQ61290 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.04□□□□□ -0.48
Cacna1eQ61290 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cacna1eQ61290 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cacna1eQ61290 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.04□□□□□ -0.48
Cacna1eQ61290 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.04□□□□□ -0.48
Cacna1eQ61290 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cacna1eQ61290 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.03□□□□□ -0.48
Cacna1eQ61290 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.03□□□□□ -0.48
Cacna1eQ61290 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Gm18711-201ENSMUST00000199341 750 ntBASIC12.03□□□□□ -0.48
Cacna1eQ61290 Gm8956-201ENSMUST00000203939 825 ntBASIC12.03□□□□□ -0.48
Cacna1eQ61290 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.03□□□□□ -0.48
Cacna1eQ61290 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Gm13937-201ENSMUST00000121000 988 ntBASIC12.03□□□□□ -0.48
Cacna1eQ61290 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Gm24844-201ENSMUST00000158679 127 ntBASIC12.03□□□□□ -0.48
Cacna1eQ61290 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Gm17931-201ENSMUST00000208132 634 ntBASIC12.03□□□□□ -0.48
Cacna1eQ61290 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.03□□□□□ -0.48
Cacna1eQ61290 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.03□□□□□ -0.48
Cacna1eQ61290 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.03□□□□□ -0.48
Cacna1eQ61290 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.03□□□□□ -0.48
Cacna1eQ61290 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cacna1eQ61290 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cacna1eQ61290 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cacna1eQ61290 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cacna1eQ61290 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cacna1eQ61290 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms