Protein–RNA interactions for Protein: Q52KF3

Spire1, Protein spire homolog 1, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spire1Q52KF3 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Gm8100-201ENSMUST00000182906 988 ntBASIC12.57□□□□□ -0.4
Spire1Q52KF3 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.57□□□□□ -0.4
Spire1Q52KF3 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.57□□□□□ -0.4
Spire1Q52KF3 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Spire1Q52KF3 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spire1Q52KF3 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.57□□□□□ -0.4
Spire1Q52KF3 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.57□□□□□ -0.4
Spire1Q52KF3 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Spire1Q52KF3 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Spire1Q52KF3 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.56□□□□□ -0.4
Spire1Q52KF3 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.56□□□□□ -0.4
Spire1Q52KF3 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.56□□□□□ -0.4
Spire1Q52KF3 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Spire1Q52KF3 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.56□□□□□ -0.4
Spire1Q52KF3 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Gm15131-201ENSMUST00000119124 595 ntBASIC12.56□□□□□ -0.4
Spire1Q52KF3 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.56□□□□□ -0.4
Spire1Q52KF3 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Spire1Q52KF3 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.56□□□□□ -0.4
Spire1Q52KF3 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Gm45770-201ENSMUST00000212105 616 ntBASIC12.56□□□□□ -0.4
Spire1Q52KF3 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.56□□□□□ -0.4
Spire1Q52KF3 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Spire1Q52KF3 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.56□□□□□ -0.4
Spire1Q52KF3 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Spire1Q52KF3 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Spire1Q52KF3 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Spire1Q52KF3 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Spire1Q52KF3 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Spire1Q52KF3 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Spire1Q52KF3 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Spire1Q52KF3 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Spire1Q52KF3 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Spire1Q52KF3 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Spire1Q52KF3 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Spire1Q52KF3 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Spire1Q52KF3 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.55□□□□□ -0.4
Spire1Q52KF3 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.55□□□□□ -0.4
Spire1Q52KF3 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Spire1Q52KF3 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.55□□□□□ -0.4
Spire1Q52KF3 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.55□□□□□ -0.4
Spire1Q52KF3 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.55□□□□□ -0.4
Spire1Q52KF3 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.55□□□□□ -0.4
Spire1Q52KF3 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Spire1Q52KF3 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Spire1Q52KF3 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Spire1Q52KF3 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Spire1Q52KF3 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Spire1Q52KF3 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Spire1Q52KF3 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms