Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxa4P06798 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxa4P06798 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxa4P06798 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxa4P06798 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxa4P06798 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxa4P06798 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxa4P06798 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxa4P06798 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Hoxa4P06798 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Hoxa4P06798 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Hoxa4P06798 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa4P06798 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa4P06798 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa4P06798 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa4P06798 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.14□□□□□ -0.47
Hoxa4P06798 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa4P06798 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa4P06798 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa4P06798 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa4P06798 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa4P06798 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Hoxa4P06798 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.14□□□□□ -0.47
Hoxa4P06798 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa4P06798 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa4P06798 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa4P06798 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa4P06798 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa4P06798 Gm11989-201ENSMUST00000117240 672 ntBASIC12.14□□□□□ -0.47
Hoxa4P06798 Gm11362-201ENSMUST00000118838 850 ntBASIC12.14□□□□□ -0.47
Hoxa4P06798 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Hoxa4P06798 Gm42599-201ENSMUST00000201308 469 ntBASIC12.14□□□□□ -0.47
Hoxa4P06798 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa4P06798 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.14□□□□□ -0.47
Hoxa4P06798 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.14□□□□□ -0.47
Hoxa4P06798 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Hoxa4P06798 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa4P06798 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa4P06798 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa4P06798 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Hoxa4P06798 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa4P06798 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa4P06798 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa4P06798 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.14□□□□□ -0.47
Hoxa4P06798 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Hoxa4P06798 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa4P06798 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Hoxa4P06798 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Hoxa4P06798 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Hoxa4P06798 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa4P06798 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Hoxa4P06798 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxa4P06798 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Hoxa4P06798 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Hoxa4P06798 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa4P06798 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa4P06798 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa4P06798 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa4P06798 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa4P06798 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa4P06798 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa4P06798 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa4P06798 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa4P06798 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa4P06798 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa4P06798 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa4P06798 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa4P06798 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa4P06798 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Hoxa4P06798 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.13□□□□□ -0.47
Hoxa4P06798 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Hoxa4P06798 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Hoxa4P06798 Gm14130-201ENSMUST00000118417 987 ntBASIC12.13□□□□□ -0.47
Hoxa4P06798 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.13□□□□□ -0.47
Hoxa4P06798 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa4P06798 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Hoxa4P06798 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.13□□□□□ -0.47
Hoxa4P06798 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.13□□□□□ -0.47
Hoxa4P06798 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa4P06798 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.13□□□□□ -0.47
Hoxa4P06798 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.13□□□□□ -0.47
Hoxa4P06798 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa4P06798 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Hoxa4P06798 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Hoxa4P06798 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.13□□□□□ -0.47
Hoxa4P06798 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.13□□□□□ -0.47
Hoxa4P06798 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa4P06798 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa4P06798 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa4P06798 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa4P06798 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa4P06798 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa4P06798 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxa4P06798 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.12□□□□□ -0.47
Hoxa4P06798 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxa4P06798 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxa4P06798 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxa4P06798 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxa4P06798 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxa4P06798 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms