Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trdmt1O55055 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.55□□□□□ -0.24
Trdmt1O55055 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trdmt1O55055 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trdmt1O55055 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trdmt1O55055 Gm11663-201ENSMUST00000117888 290 ntBASIC13.55□□□□□ -0.24
Trdmt1O55055 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trdmt1O55055 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC13.55□□□□□ -0.24
Trdmt1O55055 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC13.55□□□□□ -0.24
Trdmt1O55055 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC13.55□□□□□ -0.24
Trdmt1O55055 Gm8365-201ENSMUST00000197334 648 ntBASIC13.55□□□□□ -0.24
Trdmt1O55055 Gm45219-201ENSMUST00000205602 465 ntBASIC13.55□□□□□ -0.24
Trdmt1O55055 Gm9132-201ENSMUST00000210182 832 ntBASIC13.55□□□□□ -0.24
Trdmt1O55055 AC140293.1-201ENSMUST00000225626 1247 ntBASIC13.55□□□□□ -0.24
Trdmt1O55055 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.55□□□□□ -0.24
Trdmt1O55055 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trdmt1O55055 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.55□□□□□ -0.24
Trdmt1O55055 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trdmt1O55055 Gm21998-201ENSMUST00000117552 1308 ntBASIC13.55□□□□□ -0.24
Trdmt1O55055 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trdmt1O55055 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trdmt1O55055 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trdmt1O55055 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trdmt1O55055 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trdmt1O55055 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trdmt1O55055 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trdmt1O55055 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trdmt1O55055 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trdmt1O55055 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trdmt1O55055 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trdmt1O55055 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trdmt1O55055 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trdmt1O55055 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trdmt1O55055 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trdmt1O55055 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trdmt1O55055 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.54□□□□□ -0.24
Trdmt1O55055 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trdmt1O55055 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trdmt1O55055 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.54□□□□□ -0.24
Trdmt1O55055 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trdmt1O55055 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trdmt1O55055 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trdmt1O55055 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trdmt1O55055 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.54□□□□□ -0.24
Trdmt1O55055 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trdmt1O55055 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trdmt1O55055 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.54□□□□□ -0.24
Trdmt1O55055 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.54□□□□□ -0.24
Trdmt1O55055 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trdmt1O55055 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trdmt1O55055 Gm14247-201ENSMUST00000120950 237 ntBASIC13.54□□□□□ -0.24
Trdmt1O55055 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC13.54□□□□□ -0.24
Trdmt1O55055 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC13.54□□□□□ -0.24
Trdmt1O55055 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC13.54□□□□□ -0.24
Trdmt1O55055 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC13.54□□□□□ -0.24
Trdmt1O55055 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trdmt1O55055 Gm9540-201ENSMUST00000188230 478 ntBASIC13.54□□□□□ -0.24
Trdmt1O55055 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.54□□□□□ -0.24
Trdmt1O55055 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trdmt1O55055 Gm17831-201ENSMUST00000205579 900 ntBASIC13.54□□□□□ -0.24
Trdmt1O55055 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC13.54□□□□□ -0.24
Trdmt1O55055 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trdmt1O55055 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.54□□□□□ -0.24
Trdmt1O55055 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trdmt1O55055 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trdmt1O55055 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trdmt1O55055 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trdmt1O55055 Gm14150-201ENSMUST00000122404 1354 ntBASIC13.54□□□□□ -0.24
Trdmt1O55055 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trdmt1O55055 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trdmt1O55055 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trdmt1O55055 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.54□□□□□ -0.24
Trdmt1O55055 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trdmt1O55055 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.54□□□□□ -0.24
Trdmt1O55055 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trdmt1O55055 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trdmt1O55055 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trdmt1O55055 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trdmt1O55055 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trdmt1O55055 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trdmt1O55055 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trdmt1O55055 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trdmt1O55055 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trdmt1O55055 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trdmt1O55055 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trdmt1O55055 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trdmt1O55055 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trdmt1O55055 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC13.53□□□□□ -0.24
Trdmt1O55055 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC13.53□□□□□ -0.24
Trdmt1O55055 Gm22144-201ENSMUST00000157402 102 ntBASIC13.53□□□□□ -0.24
Trdmt1O55055 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.53□□□□□ -0.24
Trdmt1O55055 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trdmt1O55055 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trdmt1O55055 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trdmt1O55055 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trdmt1O55055 Gm9387-201ENSMUST00000098624 1320 ntBASIC13.53□□□□□ -0.24
Trdmt1O55055 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trdmt1O55055 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trdmt1O55055 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trdmt1O55055 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms