Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scn3aA2ASI5 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Scn3aA2ASI5 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Scn3aA2ASI5 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn3aA2ASI5 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.63□□□□□ -0.23
Scn3aA2ASI5 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn3aA2ASI5 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn3aA2ASI5 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn3aA2ASI5 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Scn3aA2ASI5 Gm15725-201ENSMUST00000119947 1090 ntBASIC13.63□□□□□ -0.23
Scn3aA2ASI5 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC13.63□□□□□ -0.23
Scn3aA2ASI5 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC13.63□□□□□ -0.23
Scn3aA2ASI5 Gm43916-201ENSMUST00000205062 967 ntBASIC13.63□□□□□ -0.23
Scn3aA2ASI5 AC166992.1-201ENSMUST00000216356 565 ntBASIC13.63□□□□□ -0.23
Scn3aA2ASI5 Gm6867-201ENSMUST00000219165 425 ntBASIC13.63□□□□□ -0.23
Scn3aA2ASI5 AC154290.1-201ENSMUST00000223786 1240 ntBASIC13.63□□□□□ -0.23
Scn3aA2ASI5 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn3aA2ASI5 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn3aA2ASI5 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scn3aA2ASI5 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.63□□□□□ -0.23
Scn3aA2ASI5 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn3aA2ASI5 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn3aA2ASI5 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn3aA2ASI5 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn3aA2ASI5 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn3aA2ASI5 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scn3aA2ASI5 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.62□□□□□ -0.23
Scn3aA2ASI5 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC13.62□□□□□ -0.23
Scn3aA2ASI5 Gm9136-201ENSMUST00000193368 454 ntBASIC13.62□□□□□ -0.23
Scn3aA2ASI5 Gm17831-201ENSMUST00000205579 900 ntBASIC13.62□□□□□ -0.23
Scn3aA2ASI5 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Scn3aA2ASI5 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC13.62□□□□□ -0.23
Scn3aA2ASI5 AC129219.2-201ENSMUST00000224324 701 ntBASIC13.62□□□□□ -0.23
Scn3aA2ASI5 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn3aA2ASI5 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scn3aA2ASI5 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Scn3aA2ASI5 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scn3aA2ASI5 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Scn3aA2ASI5 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Scn3aA2ASI5 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Scn3aA2ASI5 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Scn3aA2ASI5 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.62□□□□□ -0.23
Scn3aA2ASI5 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn3aA2ASI5 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn3aA2ASI5 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn3aA2ASI5 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scn3aA2ASI5 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.62□□□□□ -0.23
Scn3aA2ASI5 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Scn3aA2ASI5 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn3aA2ASI5 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.62□□□□□ -0.23
Scn3aA2ASI5 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn3aA2ASI5 Gm8731-201ENSMUST00000118088 412 ntBASIC13.62□□□□□ -0.23
Scn3aA2ASI5 Gm9540-201ENSMUST00000188230 478 ntBASIC13.62□□□□□ -0.23
Scn3aA2ASI5 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Scn3aA2ASI5 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC13.62□□□□□ -0.23
Scn3aA2ASI5 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scn3aA2ASI5 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.62□□□□□ -0.23
Scn3aA2ASI5 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn3aA2ASI5 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn3aA2ASI5 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn3aA2ASI5 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn3aA2ASI5 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Scn3aA2ASI5 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3aA2ASI5 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Gm9129-201ENSMUST00000218173 1689 ntBASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3aA2ASI5 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.61□□□□□ -0.23
Scn3aA2ASI5 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Gm13916-201ENSMUST00000117368 628 ntBASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Gm11663-201ENSMUST00000117888 290 ntBASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Gm24514-201ENSMUST00000174961 285 ntBASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Gm9192-201ENSMUST00000183221 985 ntBASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Gm29499-201ENSMUST00000189151 486 ntBASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Gm28329-201ENSMUST00000191208 689 ntBASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Gm29171-201ENSMUST00000191397 486 ntBASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Gm8365-201ENSMUST00000197334 648 ntBASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3aA2ASI5 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms