Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VTA1Q9NP79 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.11■□□□□ 0.33
VTA1Q9NP79 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.11■□□□□ 0.33
VTA1Q9NP79 SERPINA13P-202ENST00000478994 924 ntBASIC17.11■□□□□ 0.33
VTA1Q9NP79 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VTA1Q9NP79 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.11■□□□□ 0.33
VTA1Q9NP79 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
VTA1Q9NP79 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.11■□□□□ 0.33
VTA1Q9NP79 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.11■□□□□ 0.33
VTA1Q9NP79 AC004466.1-201ENST00000599515 1080 ntBASIC17.11■□□□□ 0.33
VTA1Q9NP79 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VTA1Q9NP79 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
VTA1Q9NP79 AL360270.3-201ENST00000609118 1348 ntBASIC17.11■□□□□ 0.33
VTA1Q9NP79 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VTA1Q9NP79 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VTA1Q9NP79 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VTA1Q9NP79 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
VTA1Q9NP79 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
VTA1Q9NP79 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VTA1Q9NP79 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
VTA1Q9NP79 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VTA1Q9NP79 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
VTA1Q9NP79 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VTA1Q9NP79 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VTA1Q9NP79 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VTA1Q9NP79 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
VTA1Q9NP79 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VTA1Q9NP79 AC084018.2-201ENST00000613093 2607 ntBASIC17.1■□□□□ 0.33
VTA1Q9NP79 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.1■□□□□ 0.33
VTA1Q9NP79 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VTA1Q9NP79 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VTA1Q9NP79 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VTA1Q9NP79 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
VTA1Q9NP79 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VTA1Q9NP79 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VTA1Q9NP79 REXO1L5P-201ENST00000622260 2098 ntBASIC17.1■□□□□ 0.33
VTA1Q9NP79 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
VTA1Q9NP79 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VTA1Q9NP79 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
VTA1Q9NP79 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VTA1Q9NP79 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.1■□□□□ 0.33
VTA1Q9NP79 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
VTA1Q9NP79 AC100850.1-201ENST00000506768 649 ntBASIC17.1■□□□□ 0.33
VTA1Q9NP79 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.1■□□□□ 0.33
VTA1Q9NP79 NDUFV2P1-201ENST00000596415 907 ntBASIC17.1■□□□□ 0.33
VTA1Q9NP79 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
VTA1Q9NP79 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
VTA1Q9NP79 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.1■□□□□ 0.33
VTA1Q9NP79 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.1■□□□□ 0.33
VTA1Q9NP79 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.1■□□□□ 0.33
VTA1Q9NP79 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
VTA1Q9NP79 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.1■□□□□ 0.33
VTA1Q9NP79 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
VTA1Q9NP79 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
VTA1Q9NP79 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
VTA1Q9NP79 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VTA1Q9NP79 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
VTA1Q9NP79 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VTA1Q9NP79 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.09■□□□□ 0.33
VTA1Q9NP79 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VTA1Q9NP79 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
VTA1Q9NP79 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VTA1Q9NP79 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VTA1Q9NP79 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VTA1Q9NP79 AC009090.5-201ENST00000624886 2285 ntBASIC17.09■□□□□ 0.33
VTA1Q9NP79 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.09■□□□□ 0.33
VTA1Q9NP79 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
VTA1Q9NP79 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
VTA1Q9NP79 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VTA1Q9NP79 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
VTA1Q9NP79 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VTA1Q9NP79 CICP13-201ENST00000422015 2789 ntBASIC17.09■□□□□ 0.33
VTA1Q9NP79 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
VTA1Q9NP79 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VTA1Q9NP79 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VTA1Q9NP79 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC17.09■□□□□ 0.33
VTA1Q9NP79 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VTA1Q9NP79 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
VTA1Q9NP79 GHSR-202ENST00000427970 912 ntBASIC17.09■□□□□ 0.33
VTA1Q9NP79 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.09■□□□□ 0.33
VTA1Q9NP79 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
VTA1Q9NP79 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.09■□□□□ 0.33
VTA1Q9NP79 AC138649.2-201ENST00000615886 705 ntBASIC17.09■□□□□ 0.33
VTA1Q9NP79 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.09■□□□□ 0.33
VTA1Q9NP79 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.09■□□□□ 0.33
VTA1Q9NP79 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.09■□□□□ 0.33
VTA1Q9NP79 FER1L4-210ENST00000615531 5998 ntBASIC17.09■□□□□ 0.33
VTA1Q9NP79 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VTA1Q9NP79 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.09■□□□□ 0.33
VTA1Q9NP79 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
VTA1Q9NP79 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VTA1Q9NP79 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VTA1Q9NP79 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.09■□□□□ 0.33
VTA1Q9NP79 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.33
VTA1Q9NP79 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
VTA1Q9NP79 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
VTA1Q9NP79 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.08■□□□□ 0.33
VTA1Q9NP79 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
VTA1Q9NP79 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.08■□□□□ 0.33
VTA1Q9NP79 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms