Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trex1Q91XB0 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trex1Q91XB0 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trex1Q91XB0 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trex1Q91XB0 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trex1Q91XB0 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trex1Q91XB0 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trex1Q91XB0 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trex1Q91XB0 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trex1Q91XB0 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trex1Q91XB0 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trex1Q91XB0 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trex1Q91XB0 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trex1Q91XB0 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trex1Q91XB0 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.11□□□□□ -0.15
Trex1Q91XB0 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trex1Q91XB0 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trex1Q91XB0 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trex1Q91XB0 Gm9072-201ENSMUST00000218390 1514 ntBASIC14.1□□□□□ -0.15
Trex1Q91XB0 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trex1Q91XB0 Gm18782-201ENSMUST00000209023 1399 ntBASIC14.1□□□□□ -0.15
Trex1Q91XB0 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trex1Q91XB0 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.1□□□□□ -0.15
Trex1Q91XB0 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trex1Q91XB0 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trex1Q91XB0 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trex1Q91XB0 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC14.1□□□□□ -0.15
Trex1Q91XB0 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trex1Q91XB0 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC14.1□□□□□ -0.15
Trex1Q91XB0 Gm44126-201ENSMUST00000204831 514 ntBASIC14.1□□□□□ -0.15
Trex1Q91XB0 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC14.1□□□□□ -0.15
Trex1Q91XB0 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trex1Q91XB0 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC14.1□□□□□ -0.15
Trex1Q91XB0 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trex1Q91XB0 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trex1Q91XB0 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trex1Q91XB0 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trex1Q91XB0 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trex1Q91XB0 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trex1Q91XB0 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trex1Q91XB0 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trex1Q91XB0 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trex1Q91XB0 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trex1Q91XB0 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trex1Q91XB0 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trex1Q91XB0 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.1□□□□□ -0.15
Trex1Q91XB0 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trex1Q91XB0 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trex1Q91XB0 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trex1Q91XB0 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Trex1Q91XB0 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Gm23912-201ENSMUST00000104687 87 ntBASIC14.09□□□□□ -0.15
Trex1Q91XB0 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Gm12857-201ENSMUST00000117678 592 ntBASIC14.09□□□□□ -0.15
Trex1Q91XB0 Gm13461-201ENSMUST00000120980 662 ntBASIC14.09□□□□□ -0.15
Trex1Q91XB0 Cd63-ps-202ENSMUST00000154992 717 ntBASIC14.09□□□□□ -0.15
Trex1Q91XB0 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trex1Q91XB0 AC125486.1-201ENSMUST00000218701 320 ntBASIC14.09□□□□□ -0.15
Trex1Q91XB0 AC154849.4-201ENSMUST00000224868 365 ntBASIC14.09□□□□□ -0.15
Trex1Q91XB0 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC14.09□□□□□ -0.15
Trex1Q91XB0 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.09□□□□□ -0.15
Trex1Q91XB0 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trex1Q91XB0 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.09□□□□□ -0.15
Trex1Q91XB0 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trex1Q91XB0 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trex1Q91XB0 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms