Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Gm23931-201ENSMUST00000103842 109 ntBASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Gm38002-201ENSMUST00000193255 180 ntBASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Gm42627-201ENSMUST00000197347 224 ntBASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Gm44958-201ENSMUST00000203734 736 ntBASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim29Q8R2Q0 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.1□□□□□ -0.15
Trim29Q8R2Q0 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim29Q8R2Q0 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim29Q8R2Q0 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim29Q8R2Q0 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim29Q8R2Q0 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim29Q8R2Q0 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim29Q8R2Q0 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim29Q8R2Q0 Gm9083-201ENSMUST00000120423 819 ntBASIC14.1□□□□□ -0.15
Trim29Q8R2Q0 Gm8062-201ENSMUST00000139696 444 ntBASIC14.1□□□□□ -0.15
Trim29Q8R2Q0 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Trim29Q8R2Q0 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim29Q8R2Q0 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim29Q8R2Q0 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim29Q8R2Q0 Gm44882-201ENSMUST00000205702 802 ntBASIC14.1□□□□□ -0.15
Trim29Q8R2Q0 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC14.1□□□□□ -0.15
Trim29Q8R2Q0 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim29Q8R2Q0 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Trim29Q8R2Q0 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim29Q8R2Q0 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.1□□□□□ -0.15
Trim29Q8R2Q0 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim29Q8R2Q0 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Trim29Q8R2Q0 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim29Q8R2Q0 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim29Q8R2Q0 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim29Q8R2Q0 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim29Q8R2Q0 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim29Q8R2Q0 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.1□□□□□ -0.15
Trim29Q8R2Q0 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim29Q8R2Q0 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim29Q8R2Q0 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 Gm12957-201ENSMUST00000117835 377 ntBASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 Gm14999-201ENSMUST00000121039 624 ntBASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 Gm13316-201ENSMUST00000140537 691 ntBASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 Mospd4-201ENSMUST00000180618 576 ntBASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim29Q8R2Q0 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms