Protein–RNA interactions for Protein: Q8C9F4

Gm9949, Predicted gene 9949, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm9949Q8C9F4 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Gm9361-201ENSMUST00000198695 1507 ntBASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Gm25214-201ENSMUST00000104573 129 ntBASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Gm8908-201ENSMUST00000121633 1024 ntBASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Gm17420-201ENSMUST00000164753 153 ntBASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Gm9200-201ENSMUST00000118513 1354 ntBASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Gm9949Q8C9F4 Gm2238-201ENSMUST00000192074 3669 ntBASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Mir1247-201ENSMUST00000116706 82 ntBASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Gm11531-201ENSMUST00000117614 555 ntBASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Gm12058-201ENSMUST00000118614 437 ntBASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Trav4d-2-201ENSMUST00000120914 335 ntBASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Gm13570-201ENSMUST00000140763 309 ntBASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Mospd4-201ENSMUST00000180618 576 ntBASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Gm5597-201ENSMUST00000182353 1193 ntBASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Gm29396-201ENSMUST00000185659 716 ntBASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Gm44882-201ENSMUST00000205702 802 ntBASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Olfr284-202ENSMUST00000206647 966 ntBASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm9949Q8C9F4 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms