Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Gm24830-201ENSMUST00000102024 166 ntBASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Gm25890-201ENSMUST00000177643 165 ntBASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Gm22614-201ENSMUST00000178300 165 ntBASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Gm22042-201ENSMUST00000082989 165 ntBASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Gm26232-201ENSMUST00000083360 166 ntBASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Gm24136-201ENSMUST00000083374 165 ntBASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Gm26110-201ENSMUST00000083971 165 ntBASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.45□□□□□ -0.42
Pabpc5Q8C7D3 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Gm4909-201ENSMUST00000118749 794 ntBASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 B9d1os-201ENSMUST00000137010 674 ntBASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Gm2546-201ENSMUST00000182630 991 ntBASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pabpc5Q8C7D3 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pabpc5Q8C7D3 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pabpc5Q8C7D3 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pabpc5Q8C7D3 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pabpc5Q8C7D3 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Pabpc5Q8C7D3 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pabpc5Q8C7D3 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pabpc5Q8C7D3 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Pabpc5Q8C7D3 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pabpc5Q8C7D3 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.43□□□□□ -0.42
Pabpc5Q8C7D3 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pabpc5Q8C7D3 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
Pabpc5Q8C7D3 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pabpc5Q8C7D3 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pabpc5Q8C7D3 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.43□□□□□ -0.42
Pabpc5Q8C7D3 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms