Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col16a1Q8BLX7 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col16a1Q8BLX7 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Col16a1Q8BLX7 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col16a1Q8BLX7 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col16a1Q8BLX7 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col16a1Q8BLX7 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col16a1Q8BLX7 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col16a1Q8BLX7 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col16a1Q8BLX7 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Col16a1Q8BLX7 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col16a1Q8BLX7 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col16a1Q8BLX7 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col16a1Q8BLX7 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col16a1Q8BLX7 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col16a1Q8BLX7 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Col16a1Q8BLX7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Gm24398-201ENSMUST00000157870 109 ntBASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Gm4862-201ENSMUST00000170405 438 ntBASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Gm28937-201ENSMUST00000185413 695 ntBASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Gm29400-201ENSMUST00000187208 695 ntBASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Gm28662-201ENSMUST00000188446 695 ntBASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Gm28251-201ENSMUST00000188835 695 ntBASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Gm37318-201ENSMUST00000194325 695 ntBASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Gm38017-201ENSMUST00000194768 695 ntBASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Gm37287-201ENSMUST00000195449 695 ntBASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Gm37793-201ENSMUST00000195548 695 ntBASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Gm3017-201ENSMUST00000203603 1126 ntBASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Gm35713-201ENSMUST00000210516 199 ntBASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Gm7940-201ENSMUST00000218195 769 ntBASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 CT030653.1-201ENSMUST00000224382 1279 ntBASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC15.89■□□□□ 0.13
Col16a1Q8BLX7 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col16a1Q8BLX7 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC15.88■□□□□ 0.13
Col16a1Q8BLX7 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Col16a1Q8BLX7 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col16a1Q8BLX7 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col16a1Q8BLX7 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col16a1Q8BLX7 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC15.88■□□□□ 0.13
Col16a1Q8BLX7 Gm18463-201ENSMUST00000207258 474 ntBASIC15.88■□□□□ 0.13
Col16a1Q8BLX7 Gm18460-201ENSMUST00000208088 464 ntBASIC15.88■□□□□ 0.13
Col16a1Q8BLX7 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Col16a1Q8BLX7 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC15.88■□□□□ 0.13
Col16a1Q8BLX7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col16a1Q8BLX7 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col16a1Q8BLX7 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC15.88■□□□□ 0.13
Col16a1Q8BLX7 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col16a1Q8BLX7 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.88■□□□□ 0.13
Col16a1Q8BLX7 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col16a1Q8BLX7 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col16a1Q8BLX7 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col16a1Q8BLX7 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col16a1Q8BLX7 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Col16a1Q8BLX7 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col16a1Q8BLX7 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col16a1Q8BLX7 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col16a1Q8BLX7 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col16a1Q8BLX7 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col16a1Q8BLX7 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col16a1Q8BLX7 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Gm8459-201ENSMUST00000162504 760 ntBASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Gm5621-201ENSMUST00000187303 640 ntBASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Gm16380-201ENSMUST00000077997 478 ntBASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Map1b-203ENSMUST00000223725 2669 ntBASIC15.87■□□□□ 0.13
Col16a1Q8BLX7 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms