Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Gm12384-201ENSMUST00000119228 919 ntBASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Gm11964-201ENSMUST00000120982 444 ntBASIC11.95□□□□□ -0.5
Rnf38Q8BI21 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Gm17150-201ENSMUST00000165577 381 ntBASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Gm4768-201ENSMUST00000206199 686 ntBASIC11.95□□□□□ -0.5
Rnf38Q8BI21 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf38Q8BI21 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf38Q8BI21 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Gm11597-201ENSMUST00000121423 964 ntBASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Rnf38Q8BI21 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Gm24644-201ENSMUST00000157114 139 ntBASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Gm29649-201ENSMUST00000185649 419 ntBASIC11.94□□□□□ -0.5
Rnf38Q8BI21 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf38Q8BI21 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Gm6091-201ENSMUST00000098307 165 ntBASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.94□□□□□ -0.5
Rnf38Q8BI21 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Gm4984-201ENSMUST00000115987 360 ntBASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Gm4271-201ENSMUST00000174444 973 ntBASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf38Q8BI21 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms