Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 Gm5370-201ENSMUST00000187187 574 ntBASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 Gm10076-201ENSMUST00000073238 384 ntBASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sp140Q6NSQ5 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sp140Q6NSQ5 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sp140Q6NSQ5 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sp140Q6NSQ5 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sp140Q6NSQ5 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sp140Q6NSQ5 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Sp140Q6NSQ5 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Sp140Q6NSQ5 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sp140Q6NSQ5 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sp140Q6NSQ5 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sp140Q6NSQ5 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Cog3-203ENSMUST00000227473 4197 ntBASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Gm38158-201ENSMUST00000194617 339 ntBASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sp140Q6NSQ5 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Gm6023-201ENSMUST00000118217 606 ntBASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Gm42937-201ENSMUST00000197360 752 ntBASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms