Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rai1Q61818 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rai1Q61818 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rai1Q61818 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rai1Q61818 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rai1Q61818 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rai1Q61818 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rai1Q61818 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rai1Q61818 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rai1Q61818 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.78□□□□□ -0.52
Rai1Q61818 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rai1Q61818 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rai1Q61818 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Rai1Q61818 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Rai1Q61818 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rai1Q61818 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rai1Q61818 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rai1Q61818 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rai1Q61818 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rai1Q61818 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Rai1Q61818 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.78□□□□□ -0.52
Rai1Q61818 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rai1Q61818 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rai1Q61818 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rai1Q61818 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rai1Q61818 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rai1Q61818 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rai1Q61818 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rai1Q61818 Gm22920-201ENSMUST00000102175 109 ntBASIC11.78□□□□□ -0.52
Rai1Q61818 Gm25076-201ENSMUST00000104098 132 ntBASIC11.78□□□□□ -0.52
Rai1Q61818 Gm23912-201ENSMUST00000104687 87 ntBASIC11.78□□□□□ -0.52
Rai1Q61818 Gm13937-201ENSMUST00000121000 988 ntBASIC11.78□□□□□ -0.52
Rai1Q61818 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.78□□□□□ -0.52
Rai1Q61818 Gm5706-201ENSMUST00000181525 993 ntBASIC11.78□□□□□ -0.52
Rai1Q61818 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.78□□□□□ -0.52
Rai1Q61818 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rai1Q61818 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Rai1Q61818 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.78□□□□□ -0.52
Rai1Q61818 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Rai1Q61818 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rai1Q61818 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.77□□□□□ -0.52
Rai1Q61818 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rai1Q61818 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rai1Q61818 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.77□□□□□ -0.52
Rai1Q61818 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Rai1Q61818 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Rai1Q61818 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Rai1Q61818 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rai1Q61818 Gm8737-201ENSMUST00000122208 642 ntBASIC11.77□□□□□ -0.53
Rai1Q61818 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.77□□□□□ -0.53
Rai1Q61818 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rai1Q61818 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rai1Q61818 Gm3551-201ENSMUST00000190750 664 ntBASIC11.77□□□□□ -0.53
Rai1Q61818 Gm18893-201ENSMUST00000198416 943 ntBASIC11.77□□□□□ -0.53
Rai1Q61818 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rai1Q61818 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.77□□□□□ -0.53
Rai1Q61818 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.77□□□□□ -0.53
Rai1Q61818 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rai1Q61818 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rai1Q61818 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rai1Q61818 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rai1Q61818 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rai1Q61818 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rai1Q61818 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rai1Q61818 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Rai1Q61818 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rai1Q61818 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rai1Q61818 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rai1Q61818 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rai1Q61818 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rai1Q61818 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.77□□□□□ -0.53
Rai1Q61818 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rai1Q61818 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rai1Q61818 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.77□□□□□ -0.53
Rai1Q61818 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.77□□□□□ -0.53
Rai1Q61818 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Rai1Q61818 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Rai1Q61818 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Rai1Q61818 Gm4993-201ENSMUST00000118719 1174 ntBASIC11.76□□□□□ -0.53
Rai1Q61818 Gm11956-201ENSMUST00000119525 512 ntBASIC11.76□□□□□ -0.53
Rai1Q61818 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.76□□□□□ -0.53
Rai1Q61818 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rai1Q61818 Gm18367-201ENSMUST00000176139 600 ntBASIC11.76□□□□□ -0.53
Rai1Q61818 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Rai1Q61818 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Rai1Q61818 Gm6771-201ENSMUST00000182716 1001 ntBASIC11.76□□□□□ -0.53
Rai1Q61818 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rai1Q61818 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.76□□□□□ -0.53
Rai1Q61818 Gm2553-201ENSMUST00000215986 605 ntBASIC11.76□□□□□ -0.53
Rai1Q61818 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rai1Q61818 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rai1Q61818 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.76□□□□□ -0.53
Rai1Q61818 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.76□□□□□ -0.53
Rai1Q61818 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rai1Q61818 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Rai1Q61818 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rai1Q61818 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rai1Q61818 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rai1Q61818 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rai1Q61818 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms