Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ecm1Q61508 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ecm1Q61508 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ecm1Q61508 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.61□□□□□ -0.23
Ecm1Q61508 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Ecm1Q61508 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ecm1Q61508 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ecm1Q61508 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Ecm1Q61508 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ecm1Q61508 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.61□□□□□ -0.23
Ecm1Q61508 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ecm1Q61508 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ecm1Q61508 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ecm1Q61508 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ecm1Q61508 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ecm1Q61508 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ecm1Q61508 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Ecm1Q61508 Gm11660-201ENSMUST00000120955 412 ntBASIC13.61□□□□□ -0.23
Ecm1Q61508 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ecm1Q61508 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC13.61□□□□□ -0.23
Ecm1Q61508 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC13.61□□□□□ -0.23
Ecm1Q61508 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC13.61□□□□□ -0.23
Ecm1Q61508 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC13.61□□□□□ -0.23
Ecm1Q61508 AC153505.1-201ENSMUST00000218819 1071 ntBASIC13.61□□□□□ -0.23
Ecm1Q61508 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ecm1Q61508 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Ecm1Q61508 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC13.61□□□□□ -0.23
Ecm1Q61508 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ecm1Q61508 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ecm1Q61508 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ecm1Q61508 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ecm1Q61508 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.61□□□□□ -0.23
Ecm1Q61508 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ecm1Q61508 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ecm1Q61508 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ecm1Q61508 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ecm1Q61508 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ecm1Q61508 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ecm1Q61508 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ecm1Q61508 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ecm1Q61508 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ecm1Q61508 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ecm1Q61508 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ecm1Q61508 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ecm1Q61508 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ecm1Q61508 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ecm1Q61508 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.6□□□□□ -0.23
Ecm1Q61508 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ecm1Q61508 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ecm1Q61508 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.6□□□□□ -0.23
Ecm1Q61508 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ecm1Q61508 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC13.6□□□□□ -0.23
Ecm1Q61508 Gm19891-201ENSMUST00000189771 303 ntBASIC13.6□□□□□ -0.23
Ecm1Q61508 Gm18893-201ENSMUST00000198416 943 ntBASIC13.6□□□□□ -0.23
Ecm1Q61508 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC13.6□□□□□ -0.23
Ecm1Q61508 Gm18041-201ENSMUST00000218210 618 ntBASIC13.6□□□□□ -0.23
Ecm1Q61508 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ecm1Q61508 AC129219.2-201ENSMUST00000224324 701 ntBASIC13.6□□□□□ -0.23
Ecm1Q61508 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ecm1Q61508 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ecm1Q61508 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ecm1Q61508 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ecm1Q61508 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ecm1Q61508 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ecm1Q61508 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ecm1Q61508 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ecm1Q61508 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ecm1Q61508 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Ecm1Q61508 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.6□□□□□ -0.23
Ecm1Q61508 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ecm1Q61508 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ecm1Q61508 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ecm1Q61508 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ecm1Q61508 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.59□□□□□ -0.23
Ecm1Q61508 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ecm1Q61508 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ecm1Q61508 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ecm1Q61508 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Ecm1Q61508 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ecm1Q61508 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ecm1Q61508 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Ecm1Q61508 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ecm1Q61508 Gm15004-201ENSMUST00000119192 630 ntBASIC13.59□□□□□ -0.23
Ecm1Q61508 Gm11246-201ENSMUST00000120880 345 ntBASIC13.59□□□□□ -0.23
Ecm1Q61508 Gm8815-201ENSMUST00000173809 620 ntBASIC13.59□□□□□ -0.23
Ecm1Q61508 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ecm1Q61508 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ecm1Q61508 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.59□□□□□ -0.23
Ecm1Q61508 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ecm1Q61508 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ecm1Q61508 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ecm1Q61508 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ecm1Q61508 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Ecm1Q61508 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ecm1Q61508 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ecm1Q61508 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ecm1Q61508 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ecm1Q61508 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ecm1Q61508 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ecm1Q61508 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms