Protein–RNA interactions for Protein: P55097

Ctsk, Cathepsin K, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtskP55097 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.2□□□□□ -0.46
CtskP55097 Gm8712-201ENSMUST00000221090 701 ntBASIC12.2□□□□□ -0.46
CtskP55097 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.2□□□□□ -0.46
CtskP55097 Nsd1-205ENSMUST00000224693 852 ntBASIC12.2□□□□□ -0.46
CtskP55097 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
CtskP55097 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.2□□□□□ -0.46
CtskP55097 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CtskP55097 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CtskP55097 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CtskP55097 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CtskP55097 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CtskP55097 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CtskP55097 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CtskP55097 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CtskP55097 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CtskP55097 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CtskP55097 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CtskP55097 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CtskP55097 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CtskP55097 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CtskP55097 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CtskP55097 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CtskP55097 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CtskP55097 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CtskP55097 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CtskP55097 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CtskP55097 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CtskP55097 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.19□□□□□ -0.46
CtskP55097 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CtskP55097 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.19□□□□□ -0.46
CtskP55097 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
CtskP55097 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CtskP55097 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CtskP55097 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CtskP55097 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
CtskP55097 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CtskP55097 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CtskP55097 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CtskP55097 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.19□□□□□ -0.46
CtskP55097 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CtskP55097 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.19□□□□□ -0.46
CtskP55097 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CtskP55097 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.19□□□□□ -0.46
CtskP55097 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CtskP55097 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.19□□□□□ -0.46
CtskP55097 Gm17872-201ENSMUST00000222550 532 ntBASIC12.19□□□□□ -0.46
CtskP55097 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CtskP55097 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
CtskP55097 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CtskP55097 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CtskP55097 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CtskP55097 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CtskP55097 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CtskP55097 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CtskP55097 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CtskP55097 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CtskP55097 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CtskP55097 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CtskP55097 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CtskP55097 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC12.19□□□□□ -0.46
CtskP55097 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CtskP55097 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CtskP55097 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
CtskP55097 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CtskP55097 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CtskP55097 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CtskP55097 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CtskP55097 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CtskP55097 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CtskP55097 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CtskP55097 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
CtskP55097 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CtskP55097 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CtskP55097 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CtskP55097 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.18□□□□□ -0.46
CtskP55097 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.18□□□□□ -0.46
CtskP55097 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CtskP55097 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CtskP55097 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CtskP55097 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CtskP55097 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CtskP55097 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CtskP55097 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CtskP55097 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CtskP55097 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CtskP55097 Gm14277-201ENSMUST00000121195 360 ntBASIC12.18□□□□□ -0.46
CtskP55097 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CtskP55097 Gm26361-201ENSMUST00000158868 186 ntBASIC12.18□□□□□ -0.46
CtskP55097 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
CtskP55097 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
CtskP55097 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CtskP55097 Mir3547-201ENSMUST00000175461 88 ntBASIC12.18□□□□□ -0.46
CtskP55097 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CtskP55097 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.18□□□□□ -0.46
CtskP55097 Gm37201-201ENSMUST00000191845 523 ntBASIC12.18□□□□□ -0.46
CtskP55097 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.18□□□□□ -0.46
CtskP55097 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.18□□□□□ -0.46
CtskP55097 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.18□□□□□ -0.46
CtskP55097 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CtskP55097 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms