Protein–RNA interactions for Protein: O15061

SYNM, Synemin, humanhuman

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNMO15061 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
SYNMO15061 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SYNMO15061 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SYNMO15061 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SYNMO15061 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC21.74■■□□□ 1.07
SYNMO15061 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC21.74■■□□□ 1.07
SYNMO15061 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC21.74■■□□□ 1.07
SYNMO15061 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC21.74■■□□□ 1.07
SYNMO15061 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC21.74■■□□□ 1.07
SYNMO15061 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SYNMO15061 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC21.74■■□□□ 1.07
SYNMO15061 AC141586.1-203ENST00000567242 366 ntBASIC21.74■■□□□ 1.07
SYNMO15061 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC21.74■■□□□ 1.07
SYNMO15061 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC21.74■■□□□ 1.07
SYNMO15061 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC21.74■■□□□ 1.07
SYNMO15061 AC051619.9-201ENST00000623237 597 ntBASIC21.74■■□□□ 1.07
SYNMO15061 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC21.74■■□□□ 1.07
SYNMO15061 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC21.73■■□□□ 1.07
SYNMO15061 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC21.73■■□□□ 1.07
SYNMO15061 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYNMO15061 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYNMO15061 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SYNMO15061 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC21.73■■□□□ 1.07
SYNMO15061 AC025271.4-201ENST00000621477 1726 ntBASIC21.73■■□□□ 1.07
SYNMO15061 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC21.73■■□□□ 1.07
SYNMO15061 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SYNMO15061 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC21.73■■□□□ 1.07
SYNMO15061 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SYNMO15061 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYNMO15061 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SYNMO15061 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC21.73■■□□□ 1.07
SYNMO15061 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC21.73■■□□□ 1.07
SYNMO15061 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SYNMO15061 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC21.73■■□□□ 1.07
SYNMO15061 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SYNMO15061 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC21.73■■□□□ 1.07
SYNMO15061 KRT8P21-201ENST00000430398 1491 ntBASIC21.73■■□□□ 1.07
SYNMO15061 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC21.73■■□□□ 1.07
SYNMO15061 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC21.73■■□□□ 1.07
SYNMO15061 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC21.73■■□□□ 1.07
SYNMO15061 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SYNMO15061 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYNMO15061 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYNMO15061 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SYNMO15061 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC21.72■■□□□ 1.07
SYNMO15061 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC21.72■■□□□ 1.07
SYNMO15061 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYNMO15061 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYNMO15061 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
SYNMO15061 TBC1D3J-201ENST00000620719 1426 ntBASIC21.72■■□□□ 1.07
SYNMO15061 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYNMO15061 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYNMO15061 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SYNMO15061 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SYNMO15061 KRT18P36-201ENST00000411618 1276 ntBASIC21.72■■□□□ 1.07
SYNMO15061 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYNMO15061 RN7SL67P-201ENST00000492147 296 ntBASIC21.72■■□□□ 1.07
SYNMO15061 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC21.72■■□□□ 1.07
SYNMO15061 AC008805.1-201ENST00000590892 364 ntBASIC21.72■■□□□ 1.07
SYNMO15061 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC21.72■■□□□ 1.07
SYNMO15061 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC21.72■■□□□ 1.07
SYNMO15061 NAP1L6-202ENST00000641404 1222 ntBASIC21.72■■□□□ 1.07
SYNMO15061 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYNMO15061 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC21.72■■□□□ 1.07
SYNMO15061 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYNMO15061 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC21.72■■□□□ 1.07
SYNMO15061 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYNMO15061 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
SYNMO15061 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SYNMO15061 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYNMO15061 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYNMO15061 PES1-204ENST00000402284 2144 ntTSL 5 BASIC21.72■■□□□ 1.07
SYNMO15061 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SYNMO15061 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYNMO15061 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYNMO15061 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SYNMO15061 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC21.71■■□□□ 1.07
SYNMO15061 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SYNMO15061 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SYNMO15061 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC21.71■■□□□ 1.07
SYNMO15061 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC21.71■■□□□ 1.07
SYNMO15061 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SYNMO15061 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC21.71■■□□□ 1.07
SYNMO15061 DNAJB1P1-201ENST00000429417 1024 ntBASIC21.71■■□□□ 1.07
SYNMO15061 FAM58BP-201ENST00000439056 645 ntBASIC21.71■■□□□ 1.07
SYNMO15061 AL645933.1-201ENST00000440087 609 ntBASIC21.71■■□□□ 1.07
SYNMO15061 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SYNMO15061 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC21.71■■□□□ 1.07
SYNMO15061 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC21.71■■□□□ 1.07
SYNMO15061 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC21.71■■□□□ 1.07
SYNMO15061 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
SYNMO15061 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SYNMO15061 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SYNMO15061 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SYNMO15061 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SYNMO15061 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SYNMO15061 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SYNMO15061 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SYNMO15061 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SYNMO15061 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms