Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.36■□□□□ 0.21
UBA3Q8TBC4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBA3Q8TBC4 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBA3Q8TBC4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UBA3Q8TBC4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBA3Q8TBC4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBA3Q8TBC4 AL359258.3-201ENST00000622910 2331 ntBASIC16.36■□□□□ 0.21
UBA3Q8TBC4 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
UBA3Q8TBC4 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UBA3Q8TBC4 INTS4P2-202ENST00000614726 2019 ntBASIC16.36■□□□□ 0.21
UBA3Q8TBC4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBA3Q8TBC4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UBA3Q8TBC4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBA3Q8TBC4 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
UBA3Q8TBC4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBA3Q8TBC4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBA3Q8TBC4 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.35■□□□□ 0.21
UBA3Q8TBC4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UBA3Q8TBC4 AC126365.1-201ENST00000578585 1514 ntBASIC16.35■□□□□ 0.21
UBA3Q8TBC4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBA3Q8TBC4 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
UBA3Q8TBC4 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBA3Q8TBC4 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBA3Q8TBC4 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBA3Q8TBC4 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBA3Q8TBC4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBA3Q8TBC4 AL035633.1-201ENST00000406139 838 ntBASIC16.35■□□□□ 0.21
UBA3Q8TBC4 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UBA3Q8TBC4 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.35■□□□□ 0.21
UBA3Q8TBC4 AP005018.1-201ENST00000525475 301 ntBASIC16.35■□□□□ 0.21
UBA3Q8TBC4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.35■□□□□ 0.21
UBA3Q8TBC4 AC120045.2-201ENST00000567334 178 ntBASIC16.35■□□□□ 0.21
UBA3Q8TBC4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UBA3Q8TBC4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.35■□□□□ 0.21
UBA3Q8TBC4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBA3Q8TBC4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.35■□□□□ 0.21
UBA3Q8TBC4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.35■□□□□ 0.21
UBA3Q8TBC4 AC025048.6-201ENST00000634326 1161 ntBASIC16.35■□□□□ 0.21
UBA3Q8TBC4 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
UBA3Q8TBC4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
UBA3Q8TBC4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.35■□□□□ 0.21
UBA3Q8TBC4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBA3Q8TBC4 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBA3Q8TBC4 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
UBA3Q8TBC4 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UBA3Q8TBC4 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
UBA3Q8TBC4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBA3Q8TBC4 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
UBA3Q8TBC4 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBA3Q8TBC4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBA3Q8TBC4 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
UBA3Q8TBC4 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBA3Q8TBC4 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
UBA3Q8TBC4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.34■□□□□ 0.21
UBA3Q8TBC4 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBA3Q8TBC4 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.34■□□□□ 0.21
UBA3Q8TBC4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBA3Q8TBC4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBA3Q8TBC4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBA3Q8TBC4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBA3Q8TBC4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBA3Q8TBC4 AL442647.2-201ENST00000429864 857 ntBASIC16.34■□□□□ 0.21
UBA3Q8TBC4 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.34■□□□□ 0.21
UBA3Q8TBC4 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.34■□□□□ 0.21
UBA3Q8TBC4 AC133539.2-201ENST00000604757 467 ntBASIC16.34■□□□□ 0.21
UBA3Q8TBC4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.34■□□□□ 0.21
UBA3Q8TBC4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.34■□□□□ 0.21
UBA3Q8TBC4 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBA3Q8TBC4 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.34■□□□□ 0.21
UBA3Q8TBC4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
UBA3Q8TBC4 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
UBA3Q8TBC4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
UBA3Q8TBC4 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBA3Q8TBC4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBA3Q8TBC4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.34■□□□□ 0.21
UBA3Q8TBC4 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
UBA3Q8TBC4 AC063926.3-201ENST00000624734 5658 ntBASIC16.34■□□□□ 0.21
UBA3Q8TBC4 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBA3Q8TBC4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
UBA3Q8TBC4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
UBA3Q8TBC4 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
UBA3Q8TBC4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.33■□□□□ 0.21
UBA3Q8TBC4 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
UBA3Q8TBC4 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
UBA3Q8TBC4 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
UBA3Q8TBC4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.33■□□□□ 0.21
UBA3Q8TBC4 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
UBA3Q8TBC4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.33■□□□□ 0.21
UBA3Q8TBC4 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBA3Q8TBC4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.33■□□□□ 0.2
UBA3Q8TBC4 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBA3Q8TBC4 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBA3Q8TBC4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBA3Q8TBC4 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBA3Q8TBC4 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBA3Q8TBC4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBA3Q8TBC4 C1QBPP1-201ENST00000400117 770 ntBASIC16.33■□□□□ 0.2
UBA3Q8TBC4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.33■□□□□ 0.2
UBA3Q8TBC4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.33■□□□□ 0.2
UBA3Q8TBC4 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms