Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Prpf40bQ80W14 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40bQ80W14 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40bQ80W14 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40bQ80W14 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40bQ80W14 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40bQ80W14 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40bQ80W14 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40bQ80W14 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40bQ80W14 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Prpf40bQ80W14 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Prpf40bQ80W14 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.31□□□□□ -0.12
Prpf40bQ80W14 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40bQ80W14 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40bQ80W14 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40bQ80W14 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40bQ80W14 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC14.31□□□□□ -0.12
Prpf40bQ80W14 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC14.31□□□□□ -0.12
Prpf40bQ80W14 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC14.31□□□□□ -0.12
Prpf40bQ80W14 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.31□□□□□ -0.12
Prpf40bQ80W14 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC14.31□□□□□ -0.12
Prpf40bQ80W14 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.31□□□□□ -0.12
Prpf40bQ80W14 AC154849.4-201ENSMUST00000224868 365 ntBASIC14.31□□□□□ -0.12
Prpf40bQ80W14 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.31□□□□□ -0.12
Prpf40bQ80W14 Gm10312-201ENSMUST00000078515 489 ntBASIC14.31□□□□□ -0.12
Prpf40bQ80W14 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40bQ80W14 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40bQ80W14 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40bQ80W14 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40bQ80W14 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40bQ80W14 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40bQ80W14 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40bQ80W14 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.31□□□□□ -0.12
Prpf40bQ80W14 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Prpf40bQ80W14 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Prpf40bQ80W14 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40bQ80W14 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf40bQ80W14 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Prpf40bQ80W14 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40bQ80W14 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40bQ80W14 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40bQ80W14 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40bQ80W14 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40bQ80W14 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.3□□□□□ -0.12
Prpf40bQ80W14 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40bQ80W14 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40bQ80W14 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40bQ80W14 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40bQ80W14 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Prpf40bQ80W14 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40bQ80W14 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Prpf40bQ80W14 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40bQ80W14 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Prpf40bQ80W14 Gm13888-201ENSMUST00000119148 422 ntBASIC14.3□□□□□ -0.12
Prpf40bQ80W14 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40bQ80W14 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40bQ80W14 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC14.3□□□□□ -0.12
Prpf40bQ80W14 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC14.3□□□□□ -0.12
Prpf40bQ80W14 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Prpf40bQ80W14 Gm9540-201ENSMUST00000188230 478 ntBASIC14.3□□□□□ -0.12
Prpf40bQ80W14 AC159103.1-201ENSMUST00000228325 429 ntBASIC14.3□□□□□ -0.12
Prpf40bQ80W14 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40bQ80W14 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40bQ80W14 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40bQ80W14 Gm10179-201ENSMUST00000086233 688 ntBASIC14.3□□□□□ -0.12
Prpf40bQ80W14 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40bQ80W14 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40bQ80W14 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40bQ80W14 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.3□□□□□ -0.12
Prpf40bQ80W14 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
Prpf40bQ80W14 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40bQ80W14 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40bQ80W14 Gm44999-201ENSMUST00000207456 1493 ntBASIC14.3□□□□□ -0.12
Prpf40bQ80W14 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40bQ80W14 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40bQ80W14 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40bQ80W14 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 CT009713.10-201ENSMUST00000225013 1986 ntBASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.29□□□□□ -0.12
Prpf40bQ80W14 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms