Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Mir7221-201ENSMUST00000184009 72 ntBASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Gm5950-201ENSMUST00000213337 772 ntBASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Gm12795-201ENSMUST00000117594 539 ntBASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Gm11340-201ENSMUST00000119226 412 ntBASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Gm18734-201ENSMUST00000172937 808 ntBASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Gm38114-201ENSMUST00000191877 1232 ntBASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Gm44999-201ENSMUST00000207456 1493 ntBASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.03□□□□□ -0.32
Prpf38bQ80SY5 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Prpf38bQ80SY5 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Prpf38bQ80SY5 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Prpf38bQ80SY5 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Prpf38bQ80SY5 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Prpf38bQ80SY5 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Prpf38bQ80SY5 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Prpf38bQ80SY5 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Prpf38bQ80SY5 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Gm25214-201ENSMUST00000104573 129 ntBASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Gm27552-201ENSMUST00000183351 62 ntBASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Gm27844-201ENSMUST00000183613 62 ntBASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Gm7848-201ENSMUST00000210739 718 ntBASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 AC099645.1-201ENSMUST00000226476 1105 ntBASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Gm38376-201ENSMUST00000195493 2253 ntBASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf38bQ80SY5 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms