Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sp140Q6NSQ5 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Gm13875-201ENSMUST00000120162 282 ntBASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Gm8227-201ENSMUST00000223306 571 ntBASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sp140Q6NSQ5 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sp140Q6NSQ5 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sp140Q6NSQ5 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sp140Q6NSQ5 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sp140Q6NSQ5 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.54□□□□□ -0.4
Sp140Q6NSQ5 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sp140Q6NSQ5 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sp140Q6NSQ5 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sp140Q6NSQ5 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.54□□□□□ -0.4
Sp140Q6NSQ5 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sp140Q6NSQ5 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.54□□□□□ -0.4
Sp140Q6NSQ5 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.54□□□□□ -0.4
Sp140Q6NSQ5 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sp140Q6NSQ5 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.54□□□□□ -0.4
Sp140Q6NSQ5 Gm44882-201ENSMUST00000205702 802 ntBASIC12.54□□□□□ -0.4
Sp140Q6NSQ5 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.54□□□□□ -0.4
Sp140Q6NSQ5 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sp140Q6NSQ5 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sp140Q6NSQ5 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sp140Q6NSQ5 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sp140Q6NSQ5 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sp140Q6NSQ5 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sp140Q6NSQ5 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sp140Q6NSQ5 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sp140Q6NSQ5 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sp140Q6NSQ5 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sp140Q6NSQ5 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sp140Q6NSQ5 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Sp140Q6NSQ5 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sp140Q6NSQ5 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sp140Q6NSQ5 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Sp140Q6NSQ5 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sp140Q6NSQ5 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sp140Q6NSQ5 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms