Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col11a1Q61245 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Col11a1Q61245 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col11a1Q61245 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col11a1Q61245 Gm45199-201ENSMUST00000207640 1507 ntBASIC13.56□□□□□ -0.24
Col11a1Q61245 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col11a1Q61245 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col11a1Q61245 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col11a1Q61245 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.55□□□□□ -0.24
Col11a1Q61245 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Col11a1Q61245 Gm22594-201ENSMUST00000104251 130 ntBASIC13.55□□□□□ -0.24
Col11a1Q61245 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col11a1Q61245 Gm12194-201ENSMUST00000117756 1012 ntBASIC13.55□□□□□ -0.24
Col11a1Q61245 Gm25604-201ENSMUST00000158359 133 ntBASIC13.55□□□□□ -0.24
Col11a1Q61245 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col11a1Q61245 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC13.55□□□□□ -0.24
Col11a1Q61245 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC13.55□□□□□ -0.24
Col11a1Q61245 Gm14005-208ENSMUST00000223654 681 ntBASIC13.55□□□□□ -0.24
Col11a1Q61245 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col11a1Q61245 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col11a1Q61245 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Col11a1Q61245 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC13.55□□□□□ -0.24
Col11a1Q61245 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Col11a1Q61245 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col11a1Q61245 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.55□□□□□ -0.24
Col11a1Q61245 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col11a1Q61245 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col11a1Q61245 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Col11a1Q61245 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
Col11a1Q61245 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col11a1Q61245 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.55□□□□□ -0.24
Col11a1Q61245 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC13.55□□□□□ -0.24
Col11a1Q61245 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col11a1Q61245 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col11a1Q61245 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Col11a1Q61245 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.55□□□□□ -0.24
Col11a1Q61245 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.55□□□□□ -0.24
Col11a1Q61245 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.55□□□□□ -0.24
Col11a1Q61245 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Col11a1Q61245 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.55□□□□□ -0.24
Col11a1Q61245 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col11a1Q61245 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col11a1Q61245 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col11a1Q61245 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col11a1Q61245 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Col11a1Q61245 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col11a1Q61245 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Col11a1Q61245 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Col11a1Q61245 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col11a1Q61245 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.55□□□□□ -0.24
Col11a1Q61245 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col11a1Q61245 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col11a1Q61245 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Col11a1Q61245 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC13.55□□□□□ -0.24
Col11a1Q61245 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Col11a1Q61245 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Col11a1Q61245 Gm12791-201ENSMUST00000120788 655 ntBASIC13.55□□□□□ -0.24
Col11a1Q61245 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC13.55□□□□□ -0.24
Col11a1Q61245 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col11a1Q61245 Gm8459-201ENSMUST00000162504 760 ntBASIC13.55□□□□□ -0.24
Col11a1Q61245 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Col11a1Q61245 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Col11a1Q61245 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Col11a1Q61245 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Col11a1Q61245 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Col11a1Q61245 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Col11a1Q61245 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Col11a1Q61245 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.55□□□□□ -0.24
Col11a1Q61245 Gm34379-201ENSMUST00000195036 290 ntBASIC13.55□□□□□ -0.24
Col11a1Q61245 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC13.55□□□□□ -0.24
Col11a1Q61245 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col11a1Q61245 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Col11a1Q61245 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col11a1Q61245 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Col11a1Q61245 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col11a1Q61245 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Col11a1Q61245 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col11a1Q61245 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col11a1Q61245 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Col11a1Q61245 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col11a1Q61245 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.54□□□□□ -0.24
Col11a1Q61245 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.54□□□□□ -0.24
Col11a1Q61245 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Col11a1Q61245 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.54□□□□□ -0.24
Col11a1Q61245 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Col11a1Q61245 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col11a1Q61245 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col11a1Q61245 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col11a1Q61245 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col11a1Q61245 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col11a1Q61245 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col11a1Q61245 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col11a1Q61245 Gm11578-201ENSMUST00000118530 459 ntBASIC13.54□□□□□ -0.24
Col11a1Q61245 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Col11a1Q61245 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Col11a1Q61245 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Col11a1Q61245 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC13.54□□□□□ -0.24
Col11a1Q61245 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col11a1Q61245 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC13.54□□□□□ -0.24
Col11a1Q61245 Gm43334-201ENSMUST00000197740 1318 ntBASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms