Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Gm9794-201ENSMUST00000202370 423 ntBASIC12.66□□□□□ -0.38
SftpbP50405 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.66□□□□□ -0.38
SftpbP50405 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpbP50405 Gm24526-201ENSMUST00000082921 158 ntBASIC12.66□□□□□ -0.38
SftpbP50405 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SftpbP50405 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpbP50405 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SftpbP50405 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpbP50405 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpbP50405 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.66□□□□□ -0.38
SftpbP50405 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpbP50405 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpbP50405 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
SftpbP50405 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
SftpbP50405 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SftpbP50405 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpbP50405 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.66□□□□□ -0.38
SftpbP50405 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SftpbP50405 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpbP50405 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpbP50405 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SftpbP50405 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.65□□□□□ -0.38
SftpbP50405 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SftpbP50405 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SftpbP50405 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SftpbP50405 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SftpbP50405 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SftpbP50405 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SftpbP50405 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SftpbP50405 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.65□□□□□ -0.38
SftpbP50405 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SftpbP50405 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SftpbP50405 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.65□□□□□ -0.38
SftpbP50405 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SftpbP50405 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SftpbP50405 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SftpbP50405 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SftpbP50405 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.65□□□□□ -0.38
SftpbP50405 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.65□□□□□ -0.38
SftpbP50405 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SftpbP50405 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.65□□□□□ -0.38
SftpbP50405 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SftpbP50405 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.65□□□□□ -0.38
SftpbP50405 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.65□□□□□ -0.38
SftpbP50405 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.65□□□□□ -0.38
SftpbP50405 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SftpbP50405 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SftpbP50405 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SftpbP50405 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SftpbP50405 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SftpbP50405 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
SftpbP50405 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
SftpbP50405 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SftpbP50405 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SftpbP50405 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
SftpbP50405 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SftpbP50405 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpbP50405 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpbP50405 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpbP50405 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpbP50405 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SftpbP50405 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpbP50405 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpbP50405 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpbP50405 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SftpbP50405 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpbP50405 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SftpbP50405 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpbP50405 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpbP50405 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpbP50405 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
SftpbP50405 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpbP50405 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SftpbP50405 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpbP50405 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SftpbP50405 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpbP50405 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.64□□□□□ -0.39
SftpbP50405 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.64□□□□□ -0.39
SftpbP50405 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpbP50405 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpbP50405 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpbP50405 Gm6091-201ENSMUST00000098307 165 ntBASIC12.64□□□□□ -0.39
SftpbP50405 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
SftpbP50405 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SftpbP50405 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
SftpbP50405 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SftpbP50405 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.64□□□□□ -0.39
SftpbP50405 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.64□□□□□ -0.39
SftpbP50405 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpbP50405 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SftpbP50405 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.64□□□□□ -0.39
SftpbP50405 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SftpbP50405 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpbP50405 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SftpbP50405 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpbP50405 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpbP50405 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SftpbP50405 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SftpbP50405 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SftpbP50405 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms