Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.91□□□□□ -0.02
Ccdc9Q8VC31 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ccdc9Q8VC31 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc9Q8VC31 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Ccdc9Q8VC31 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc9Q8VC31 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.91□□□□□ -0.02
Ccdc9Q8VC31 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc9Q8VC31 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.91□□□□□ -0.02
Ccdc9Q8VC31 Gm29541-201ENSMUST00000191351 678 ntBASIC14.91□□□□□ -0.02
Ccdc9Q8VC31 Gm7774-201ENSMUST00000200064 533 ntBASIC14.91□□□□□ -0.02
Ccdc9Q8VC31 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc9Q8VC31 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc9Q8VC31 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc9Q8VC31 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ccdc9Q8VC31 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc9Q8VC31 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC14.91□□□□□ -0.02
Ccdc9Q8VC31 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc9Q8VC31 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Ccdc9Q8VC31 Gm43999-201ENSMUST00000204286 2889 ntBASIC14.91□□□□□ -0.02
Ccdc9Q8VC31 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc9Q8VC31 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Gm9719-201ENSMUST00000162765 543 ntBASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Gm45453-201ENSMUST00000211758 853 ntBASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 BC001981-202ENSMUST00000191393 1545 ntBASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc9Q8VC31 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 AC107453.4-201ENSMUST00000227068 1817 ntBASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.89□□□□□ -0.03
Ccdc9Q8VC31 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms