Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clip4Q8CI96 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clip4Q8CI96 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clip4Q8CI96 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clip4Q8CI96 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Clip4Q8CI96 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clip4Q8CI96 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clip4Q8CI96 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clip4Q8CI96 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clip4Q8CI96 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Clip4Q8CI96 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clip4Q8CI96 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.5□□□□□ -0.41
Clip4Q8CI96 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clip4Q8CI96 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Clip4Q8CI96 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clip4Q8CI96 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clip4Q8CI96 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Clip4Q8CI96 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clip4Q8CI96 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.5□□□□□ -0.41
Clip4Q8CI96 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.5□□□□□ -0.41
Clip4Q8CI96 Gm7809-201ENSMUST00000153199 742 ntBASIC12.5□□□□□ -0.41
Clip4Q8CI96 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Clip4Q8CI96 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clip4Q8CI96 Gm42627-201ENSMUST00000197347 224 ntBASIC12.5□□□□□ -0.41
Clip4Q8CI96 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clip4Q8CI96 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clip4Q8CI96 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.5□□□□□ -0.41
Clip4Q8CI96 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.5□□□□□ -0.41
Clip4Q8CI96 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.5□□□□□ -0.41
Clip4Q8CI96 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.5□□□□□ -0.41
Clip4Q8CI96 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clip4Q8CI96 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clip4Q8CI96 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clip4Q8CI96 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.5□□□□□ -0.41
Clip4Q8CI96 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clip4Q8CI96 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.5□□□□□ -0.41
Clip4Q8CI96 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.5□□□□□ -0.41
Clip4Q8CI96 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clip4Q8CI96 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clip4Q8CI96 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clip4Q8CI96 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Clip4Q8CI96 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Clip4Q8CI96 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip4Q8CI96 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.49□□□□□ -0.41
Clip4Q8CI96 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.49□□□□□ -0.41
Clip4Q8CI96 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.49□□□□□ -0.41
Clip4Q8CI96 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.49□□□□□ -0.41
Clip4Q8CI96 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.49□□□□□ -0.41
Clip4Q8CI96 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.49□□□□□ -0.41
Clip4Q8CI96 Gm43118-201ENSMUST00000199149 775 ntBASIC12.49□□□□□ -0.41
Clip4Q8CI96 Gm18584-201ENSMUST00000203098 964 ntBASIC12.49□□□□□ -0.41
Clip4Q8CI96 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.49□□□□□ -0.41
Clip4Q8CI96 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.49□□□□□ -0.41
Clip4Q8CI96 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.49□□□□□ -0.41
Clip4Q8CI96 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.49□□□□□ -0.41
Clip4Q8CI96 Gm32025-201ENSMUST00000217960 307 ntBASIC12.49□□□□□ -0.41
Clip4Q8CI96 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Clip4Q8CI96 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.49□□□□□ -0.41
Clip4Q8CI96 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.49□□□□□ -0.41
Clip4Q8CI96 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clip4Q8CI96 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip4Q8CI96 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clip4Q8CI96 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms