Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 Gm8099-201ENSMUST00000200510 742 ntBASIC13.17□□□□□ -0.3
Trim6Q8BGE7 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
Trim6Q8BGE7 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim6Q8BGE7 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim6Q8BGE7 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim6Q8BGE7 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim6Q8BGE7 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim6Q8BGE7 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim6Q8BGE7 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim6Q8BGE7 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim6Q8BGE7 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim6Q8BGE7 Gm2128-201ENSMUST00000108009 2560 ntBASIC13.16□□□□□ -0.3
Trim6Q8BGE7 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim6Q8BGE7 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim6Q8BGE7 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Trim6Q8BGE7 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trim6Q8BGE7 Gm7488-201ENSMUST00000117148 684 ntBASIC13.16□□□□□ -0.3
Trim6Q8BGE7 Gm8805-201ENSMUST00000117848 313 ntBASIC13.16□□□□□ -0.3
Trim6Q8BGE7 Gm13123-201ENSMUST00000122173 492 ntBASIC13.16□□□□□ -0.3
Trim6Q8BGE7 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.16□□□□□ -0.3
Trim6Q8BGE7 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim6Q8BGE7 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trim6Q8BGE7 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim6Q8BGE7 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim6Q8BGE7 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.16□□□□□ -0.3
Trim6Q8BGE7 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim6Q8BGE7 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.16□□□□□ -0.3
Trim6Q8BGE7 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Trim6Q8BGE7 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim6Q8BGE7 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim6Q8BGE7 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim6Q8BGE7 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim6Q8BGE7 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim6Q8BGE7 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim6Q8BGE7 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.16□□□□□ -0.3
Trim6Q8BGE7 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim6Q8BGE7 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim6Q8BGE7 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim6Q8BGE7 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim6Q8BGE7 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim6Q8BGE7 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim6Q8BGE7 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim6Q8BGE7 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trim6Q8BGE7 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim6Q8BGE7 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim6Q8BGE7 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim6Q8BGE7 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trim6Q8BGE7 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim6Q8BGE7 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
Trim6Q8BGE7 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim6Q8BGE7 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim6Q8BGE7 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Trim6Q8BGE7 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim6Q8BGE7 Gm13612-201ENSMUST00000119276 390 ntBASIC13.15□□□□□ -0.3
Trim6Q8BGE7 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim6Q8BGE7 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trim6Q8BGE7 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.15□□□□□ -0.3
Trim6Q8BGE7 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.15□□□□□ -0.3
Trim6Q8BGE7 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim6Q8BGE7 Gm8463-201ENSMUST00000208573 613 ntBASIC13.15□□□□□ -0.3
Trim6Q8BGE7 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim6Q8BGE7 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.15□□□□□ -0.3
Trim6Q8BGE7 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim6Q8BGE7 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trim6Q8BGE7 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim6Q8BGE7 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim6Q8BGE7 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 111.3 ms