Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC15.98■□□□□ 0.15
Hoxc9P09633 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Hoxc9P09633 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hoxc9P09633 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hoxc9P09633 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Hoxc9P09633 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hoxc9P09633 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hoxc9P09633 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hoxc9P09633 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.97■□□□□ 0.15
Hoxc9P09633 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hoxc9P09633 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hoxc9P09633 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hoxc9P09633 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hoxc9P09633 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.97■□□□□ 0.15
Hoxc9P09633 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hoxc9P09633 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hoxc9P09633 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hoxc9P09633 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hoxc9P09633 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Hoxc9P09633 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Hoxc9P09633 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC15.97■□□□□ 0.15
Hoxc9P09633 Gm9463-201ENSMUST00000206707 601 ntBASIC15.97■□□□□ 0.15
Hoxc9P09633 Gm45550-201ENSMUST00000209380 946 ntBASIC15.97■□□□□ 0.15
Hoxc9P09633 Gm9132-201ENSMUST00000210182 832 ntBASIC15.97■□□□□ 0.15
Hoxc9P09633 Gm45575-201ENSMUST00000210283 548 ntBASIC15.97■□□□□ 0.15
Hoxc9P09633 Gm18974-201ENSMUST00000221478 1031 ntBASIC15.97■□□□□ 0.15
Hoxc9P09633 AC140293.1-201ENSMUST00000225626 1247 ntBASIC15.97■□□□□ 0.15
Hoxc9P09633 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hoxc9P09633 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Hoxc9P09633 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.97■□□□□ 0.15
Hoxc9P09633 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hoxc9P09633 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Hoxc9P09633 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Hoxc9P09633 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Hoxc9P09633 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hoxc9P09633 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hoxc9P09633 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hoxc9P09633 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC15.97■□□□□ 0.15
Hoxc9P09633 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hoxc9P09633 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hoxc9P09633 Gm44942-201ENSMUST00000096093 2072 ntBASIC15.96■□□□□ 0.15
Hoxc9P09633 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hoxc9P09633 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hoxc9P09633 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
Hoxc9P09633 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Hoxc9P09633 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Hoxc9P09633 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Hoxc9P09633 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hoxc9P09633 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Hoxc9P09633 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hoxc9P09633 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Hoxc9P09633 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hoxc9P09633 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC15.96■□□□□ 0.15
Hoxc9P09633 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC15.96■□□□□ 0.15
Hoxc9P09633 Gm43830-201ENSMUST00000198760 1067 ntBASIC15.96■□□□□ 0.15
Hoxc9P09633 Gm45219-201ENSMUST00000205602 465 ntBASIC15.96■□□□□ 0.15
Hoxc9P09633 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hoxc9P09633 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hoxc9P09633 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hoxc9P09633 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hoxc9P09633 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hoxc9P09633 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hoxc9P09633 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC15.96■□□□□ 0.15
Hoxc9P09633 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Hoxc9P09633 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hoxc9P09633 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC15.96■□□□□ 0.15
Hoxc9P09633 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Hoxc9P09633 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Hoxc9P09633 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Hoxc9P09633 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Hoxc9P09633 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hoxc9P09633 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hoxc9P09633 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Hoxc9P09633 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hoxc9P09633 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hoxc9P09633 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hoxc9P09633 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Hoxc9P09633 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC15.95■□□□□ 0.14
Hoxc9P09633 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hoxc9P09633 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC15.95■□□□□ 0.14
Hoxc9P09633 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hoxc9P09633 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hoxc9P09633 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hoxc9P09633 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Hoxc9P09633 Gm45266-201ENSMUST00000210111 2173 ntBASIC15.95■□□□□ 0.14
Hoxc9P09633 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Hoxc9P09633 Gm15004-201ENSMUST00000119192 630 ntBASIC15.95■□□□□ 0.14
Hoxc9P09633 Gm4726-201ENSMUST00000135604 736 ntBASIC15.95■□□□□ 0.14
Hoxc9P09633 Gm6019-201ENSMUST00000148369 736 ntBASIC15.95■□□□□ 0.14
Hoxc9P09633 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC15.95■□□□□ 0.14
Hoxc9P09633 Gm19287-201ENSMUST00000203190 358 ntBASIC15.95■□□□□ 0.14
Hoxc9P09633 Gm17831-201ENSMUST00000205579 900 ntBASIC15.95■□□□□ 0.14
Hoxc9P09633 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC15.95■□□□□ 0.14
Hoxc9P09633 AC122408.1-201ENSMUST00000218949 218 ntBASIC15.95■□□□□ 0.14
Hoxc9P09633 AC129219.2-201ENSMUST00000224324 701 ntBASIC15.95■□□□□ 0.14
Hoxc9P09633 AC171241.1-201ENSMUST00000228144 1166 ntBASIC15.95■□□□□ 0.14
Hoxc9P09633 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hoxc9P09633 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hoxc9P09633 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hoxc9P09633 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms