Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.06■□□□□ 0
TNFP01375 AC078819.1-201ENST00000547454 765 ntBASIC15.06■□□□□ 0
TNFP01375 AC012085.1-201ENST00000548270 765 ntBASIC15.06■□□□□ 0
TNFP01375 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.06■□□□□ 0
TNFP01375 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.06■□□□□ 0
TNFP01375 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.06■□□□□ 0
TNFP01375 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.06■□□□□ 0
TNFP01375 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.06■□□□□ 0
TNFP01375 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.06■□□□□ 0
TNFP01375 AC138951.2-201ENST00000623455 1161 ntBASIC15.06■□□□□ 0
TNFP01375 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.06■□□□□ 0
TNFP01375 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TNFP01375 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TNFP01375 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.06■□□□□ 0
TNFP01375 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TNFP01375 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TNFP01375 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TNFP01375 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TNFP01375 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.06■□□□□ 0
TNFP01375 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TNFP01375 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TNFP01375 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.06■□□□□ 0
TNFP01375 AC148477.4-201ENST00000613430 1793 ntBASIC15.06■□□□□ 0
TNFP01375 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TNFP01375 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.05■□□□□ 0
TNFP01375 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
TNFP01375 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
TNFP01375 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
TNFP01375 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TNFP01375 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.05■□□□□ 0
TNFP01375 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TNFP01375 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
TNFP01375 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
TNFP01375 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
TNFP01375 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TNFP01375 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TNFP01375 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.05■□□□□ 0
TNFP01375 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
TNFP01375 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TNFP01375 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
TNFP01375 TPM3P8-201ENST00000330554 643 ntBASIC15.05■□□□□ -0
TNFP01375 FAM86MP-201ENST00000340703 885 ntBASIC15.05■□□□□ -0
TNFP01375 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.05■□□□□ -0
TNFP01375 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.05■□□□□ -0
TNFP01375 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.05■□□□□ -0
TNFP01375 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.05■□□□□ -0
TNFP01375 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.05■□□□□ -0
TNFP01375 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.05■□□□□ -0
TNFP01375 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
TNFP01375 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.05■□□□□ -0
TNFP01375 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TNFP01375 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.05■□□□□ -0
TNFP01375 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.05■□□□□ -0
TNFP01375 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.05■□□□□ -0
TNFP01375 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.05■□□□□ -0
TNFP01375 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.05■□□□□ -0
TNFP01375 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.05■□□□□ -0
TNFP01375 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.05■□□□□ -0
TNFP01375 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TNFP01375 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.05■□□□□ -0
TNFP01375 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.05■□□□□ -0
TNFP01375 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.05■□□□□ -0
TNFP01375 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.05■□□□□ -0
TNFP01375 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TNFP01375 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.05■□□□□ -0
TNFP01375 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TNFP01375 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.05■□□□□ -0
TNFP01375 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TNFP01375 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ -0
TNFP01375 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TNFP01375 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TNFP01375 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TNFP01375 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TNFP01375 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TNFP01375 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.05■□□□□ -0
TNFP01375 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TNFP01375 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
TNFP01375 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TNFP01375 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.04■□□□□ -0
TNFP01375 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.04■□□□□ -0
TNFP01375 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.04■□□□□ -0
TNFP01375 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.04■□□□□ -0
TNFP01375 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TNFP01375 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.04■□□□□ -0
TNFP01375 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TNFP01375 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
TNFP01375 AHCYP2-201ENST00000430630 1300 ntBASIC15.04■□□□□ -0
TNFP01375 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TNFP01375 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TNFP01375 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.04■□□□□ -0
TNFP01375 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TNFP01375 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.04■□□□□ -0
TNFP01375 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.04■□□□□ -0
TNFP01375 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.04■□□□□ -0
TNFP01375 ACTBP11-201ENST00000436287 1126 ntBASIC15.04■□□□□ -0
TNFP01375 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.04■□□□□ -0
TNFP01375 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TNFP01375 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
TNFP01375 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.04■□□□□ -0
TNFP01375 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms