Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Gm38092-201ENSMUST00000195600 653 ntBASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Gm5884-201ENSMUST00000036712 1479 ntBASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 AC154639.1-201ENSMUST00000224393 2849 ntBASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Gm43267-201ENSMUST00000199664 1796 ntBASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.82
Trav12d-1A0N8R0 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Gm13492-201ENSMUST00000119772 665 ntBASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Gm11964-201ENSMUST00000120982 444 ntBASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Gm27243-201ENSMUST00000183964 521 ntBASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 AL593843.1-201ENSMUST00000195891 145 ntBASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 AC125206.2-201ENSMUST00000217454 574 ntBASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Gm19163-201ENSMUST00000223313 780 ntBASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Gm5912-201ENSMUST00000122282 1438 ntBASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Gm15897-201ENSMUST00000117770 1486 ntBASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Gm43823-201ENSMUST00000197391 1808 ntBASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav12d-1A0N8R0 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms