Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gm9002-201ENSMUST00000178437 499 ntBASIC10.17□□□□□ -0.78
Trav18A0A075B656 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav18A0A075B656 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav18A0A075B656 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav18A0A075B656 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav18A0A075B656 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav18A0A075B656 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Trav18A0A075B656 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.17□□□□□ -0.78
Trav18A0A075B656 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav18A0A075B656 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav18A0A075B656 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav18A0A075B656 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav18A0A075B656 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav18A0A075B656 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav18A0A075B656 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav18A0A075B656 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav18A0A075B656 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav18A0A075B656 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Trav18A0A075B656 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav18A0A075B656 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav18A0A075B656 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav18A0A075B656 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav18A0A075B656 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav18A0A075B656 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav18A0A075B656 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav18A0A075B656 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav18A0A075B656 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav18A0A075B656 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Trav18A0A075B656 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav18A0A075B656 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav18A0A075B656 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav18A0A075B656 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav18A0A075B656 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav18A0A075B656 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav18A0A075B656 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Trav18A0A075B656 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.16□□□□□ -0.78
Trav18A0A075B656 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Gm15806-201ENSMUST00000120696 955 ntBASIC10.16□□□□□ -0.78
Trav18A0A075B656 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Gm7063-201ENSMUST00000186840 981 ntBASIC10.16□□□□□ -0.78
Trav18A0A075B656 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Trav18A0A075B656 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.16□□□□□ -0.78
Trav18A0A075B656 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Gm8227-201ENSMUST00000223306 571 ntBASIC10.16□□□□□ -0.78
Trav18A0A075B656 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.16□□□□□ -0.78
Trav18A0A075B656 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.16□□□□□ -0.78
Trav18A0A075B656 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav18A0A075B656 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms