Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 FAM86MP-201ENST00000340703 885 ntBASIC19.2■□□□□ 0.66
UBE3BQ7Z3V4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC19.2■□□□□ 0.66
UBE3BQ7Z3V4 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
UBE3BQ7Z3V4 FAM21FP-201ENST00000426241 1131 ntBASIC19.2■□□□□ 0.66
UBE3BQ7Z3V4 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC19.2■□□□□ 0.66
UBE3BQ7Z3V4 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC19.2■□□□□ 0.66
UBE3BQ7Z3V4 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC19.2■□□□□ 0.66
UBE3BQ7Z3V4 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
UBE3BQ7Z3V4 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC19.2■□□□□ 0.66
UBE3BQ7Z3V4 AC079316.1-201ENST00000548397 411 ntBASIC19.2■□□□□ 0.66
UBE3BQ7Z3V4 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBE3BQ7Z3V4 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC19.2■□□□□ 0.66
UBE3BQ7Z3V4 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC19.2■□□□□ 0.66
UBE3BQ7Z3V4 ETV2-208ENST00000621247 941 ntTSL 5 BASIC19.2■□□□□ 0.66
UBE3BQ7Z3V4 AC132938.4-201ENST00000623835 848 ntBASIC19.2■□□□□ 0.66
UBE3BQ7Z3V4 AC007950.2-201ENST00000615045 2347 ntBASIC19.2■□□□□ 0.66
UBE3BQ7Z3V4 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
UBE3BQ7Z3V4 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UBE3BQ7Z3V4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBE3BQ7Z3V4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBE3BQ7Z3V4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBE3BQ7Z3V4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBE3BQ7Z3V4 LRRC59-203ENST00000576448 1531 ntBASIC19.2■□□□□ 0.66
UBE3BQ7Z3V4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBE3BQ7Z3V4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBE3BQ7Z3V4 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 ING5-213ENST00000636051 4199 ntTSL 5 BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 AC006001.1-201ENST00000325130 474 ntBASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 TPO-206ENST00000382269 1155 ntTSL 5 BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 AL645937.2-201ENST00000396808 931 ntBASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 AHRR-211ENST00000515206 462 ntTSL 5 BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 ECM1P1-201ENST00000604092 1279 ntBASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 AC009542.2-202ENST00000619004 1067 ntBASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 AC008687.7-202ENST00000637404 953 ntBASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBE3BQ7Z3V4 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 AC020658.6-201ENST00000623564 1870 ntBASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 RPS15-201ENST00000233609 534 ntTSL 2 BASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 AC104457.1-201ENST00000401024 814 ntBASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 MIR1908-201ENST00000410394 80 ntBASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 EIF3FP3-201ENST00000434851 1086 ntBASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 YBX1P6-201ENST00000442962 1002 ntBASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 RPS15-205ENST00000586686 562 ntTSL 5 BASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 RPS15-208ENST00000591804 711 ntTSL 5 BASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms