Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Rif1Q6PR54 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rif1Q6PR54 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC10.51□□□□□ -0.73
Rif1Q6PR54 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Rif1Q6PR54 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC10.51□□□□□ -0.73
Rif1Q6PR54 Gm6641-201ENSMUST00000196100 1315 ntBASIC10.51□□□□□ -0.73
Rif1Q6PR54 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rif1Q6PR54 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.51□□□□□ -0.73
Rif1Q6PR54 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rif1Q6PR54 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rif1Q6PR54 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rif1Q6PR54 Gm25063-201ENSMUST00000104666 94 ntBASIC10.51□□□□□ -0.73
Rif1Q6PR54 Gm13916-201ENSMUST00000117368 628 ntBASIC10.51□□□□□ -0.73
Rif1Q6PR54 Gm8584-201ENSMUST00000171982 758 ntBASIC10.51□□□□□ -0.73
Rif1Q6PR54 Gm5335-201ENSMUST00000182995 1000 ntBASIC10.51□□□□□ -0.73
Rif1Q6PR54 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rif1Q6PR54 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rif1Q6PR54 Gm5455-201ENSMUST00000058710 715 ntBASIC10.51□□□□□ -0.73
Rif1Q6PR54 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rif1Q6PR54 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rif1Q6PR54 Gm44065-201ENSMUST00000203184 3527 ntBASIC10.51□□□□□ -0.73
Rif1Q6PR54 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rif1Q6PR54 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
Rif1Q6PR54 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.51□□□□□ -0.73
Rif1Q6PR54 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.51□□□□□ -0.73
Rif1Q6PR54 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rif1Q6PR54 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Rif1Q6PR54 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rif1Q6PR54 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Rif1Q6PR54 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC10.51□□□□□ -0.73
Rif1Q6PR54 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC10.51□□□□□ -0.73
Rif1Q6PR54 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.51□□□□□ -0.73
Rif1Q6PR54 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC10.51□□□□□ -0.73
Rif1Q6PR54 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rif1Q6PR54 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rif1Q6PR54 Spata33-207ENSMUST00000212760 4074 ntBASIC10.51□□□□□ -0.73
Rif1Q6PR54 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Gm22763-201ENSMUST00000158374 107 ntBASIC10.5□□□□□ -0.73
Rif1Q6PR54 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Gm17936-201ENSMUST00000199413 988 ntBASIC10.5□□□□□ -0.73
Rif1Q6PR54 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC10.5□□□□□ -0.73
Rif1Q6PR54 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rif1Q6PR54 AC115122.1-201ENSMUST00000224850 1040 ntBASIC10.5□□□□□ -0.73
Rif1Q6PR54 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.5□□□□□ -0.73
Rif1Q6PR54 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rif1Q6PR54 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.5□□□□□ -0.73
Rif1Q6PR54 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rif1Q6PR54 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Ighv5-11-201ENSMUST00000193354 371 ntBASIC10.5□□□□□ -0.73
Rif1Q6PR54 Gm37782-201ENSMUST00000194879 678 ntBASIC10.5□□□□□ -0.73
Rif1Q6PR54 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rif1Q6PR54 AC124433.1-201ENSMUST00000224483 1063 ntBASIC10.5□□□□□ -0.73
Rif1Q6PR54 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rif1Q6PR54 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.49□□□□□ -0.73
Rif1Q6PR54 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC10.49□□□□□ -0.73
Rif1Q6PR54 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms