Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gabpb1Q00420 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Gabpb1Q00420 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gabpb1Q00420 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gabpb1Q00420 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gabpb1Q00420 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
Gabpb1Q00420 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gabpb1Q00420 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gabpb1Q00420 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gabpb1Q00420 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.61□□□□□ -0.39
Gabpb1Q00420 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gabpb1Q00420 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gabpb1Q00420 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gabpb1Q00420 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gabpb1Q00420 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gabpb1Q00420 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gabpb1Q00420 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.61□□□□□ -0.39
Gabpb1Q00420 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.61□□□□□ -0.39
Gabpb1Q00420 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
Gabpb1Q00420 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gabpb1Q00420 Mir1247-201ENSMUST00000116706 82 ntBASIC12.61□□□□□ -0.39
Gabpb1Q00420 Gm12058-201ENSMUST00000118614 437 ntBASIC12.61□□□□□ -0.39
Gabpb1Q00420 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Gabpb1Q00420 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Gabpb1Q00420 Gm27023-201ENSMUST00000182372 285 ntBASIC12.61□□□□□ -0.39
Gabpb1Q00420 Gm5370-201ENSMUST00000187187 574 ntBASIC12.61□□□□□ -0.39
Gabpb1Q00420 AY702102-202ENSMUST00000194651 1173 ntBASIC12.61□□□□□ -0.39
Gabpb1Q00420 Gm37008-201ENSMUST00000195712 319 ntBASIC12.61□□□□□ -0.39
Gabpb1Q00420 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.61□□□□□ -0.39
Gabpb1Q00420 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.61□□□□□ -0.39
Gabpb1Q00420 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
Gabpb1Q00420 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gabpb1Q00420 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gabpb1Q00420 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gabpb1Q00420 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.61□□□□□ -0.39
Gabpb1Q00420 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gabpb1Q00420 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gabpb1Q00420 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gabpb1Q00420 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gabpb1Q00420 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.61□□□□□ -0.39
Gabpb1Q00420 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gabpb1Q00420 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gabpb1Q00420 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gabpb1Q00420 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gabpb1Q00420 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Gabpb1Q00420 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.61□□□□□ -0.39
Gabpb1Q00420 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gabpb1Q00420 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gabpb1Q00420 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.6□□□□□ -0.39
Gabpb1Q00420 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.6□□□□□ -0.39
Gabpb1Q00420 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.6□□□□□ -0.39
Gabpb1Q00420 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Gabpb1Q00420 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.59□□□□□ -0.39
Gabpb1Q00420 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gabpb1Q00420 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gabpb1Q00420 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Gabpb1Q00420 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gabpb1Q00420 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gabpb1Q00420 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gabpb1Q00420 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Gabpb1Q00420 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Gabpb1Q00420 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gabpb1Q00420 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gabpb1Q00420 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gabpb1Q00420 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.59□□□□□ -0.39
Gabpb1Q00420 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gabpb1Q00420 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms