Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RIPK4P57078 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC20.21■□□□□ 0.83
RIPK4P57078 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RIPK4P57078 AC073347.1-201ENST00000421633 2643 ntBASIC20.21■□□□□ 0.83
RIPK4P57078 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RIPK4P57078 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
RIPK4P57078 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
RIPK4P57078 BRF1-202ENST00000379932 884 ntTSL 5 BASIC20.21■□□□□ 0.83
RIPK4P57078 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RIPK4P57078 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
RIPK4P57078 AC104457.1-201ENST00000401024 814 ntBASIC20.21■□□□□ 0.83
RIPK4P57078 AP001889.1-201ENST00000525414 633 ntBASIC20.21■□□□□ 0.83
RIPK4P57078 AC068587.3-201ENST00000526613 355 ntBASIC20.21■□□□□ 0.83
RIPK4P57078 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC20.21■□□□□ 0.83
RIPK4P57078 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RIPK4P57078 PIGL-212ENST00000581006 554 ntTSL 4 BASIC20.21■□□□□ 0.83
RIPK4P57078 APOC4-201ENST00000591600 348 ntTSL 3 BASIC20.21■□□□□ 0.83
RIPK4P57078 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RIPK4P57078 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RIPK4P57078 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RIPK4P57078 AC134312.5-201ENST00000568031 1313 ntBASIC20.21■□□□□ 0.83
RIPK4P57078 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RIPK4P57078 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RIPK4P57078 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC20.21■□□□□ 0.83
RIPK4P57078 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RIPK4P57078 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RIPK4P57078 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RIPK4P57078 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RIPK4P57078 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC20.21■□□□□ 0.83
RIPK4P57078 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC20.2■□□□□ 0.83
RIPK4P57078 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC20.2■□□□□ 0.83
RIPK4P57078 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RIPK4P57078 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC20.2■□□□□ 0.82
RIPK4P57078 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RIPK4P57078 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RIPK4P57078 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RIPK4P57078 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RIPK4P57078 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RIPK4P57078 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RIPK4P57078 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RIPK4P57078 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RIPK4P57078 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
RIPK4P57078 CASK-202ENST00000378158 3848 ntTSL 5 BASIC20.2■□□□□ 0.82
RIPK4P57078 AC079776.1-201ENST00000401540 1152 ntBASIC20.2■□□□□ 0.82
RIPK4P57078 AC112492.5-201ENST00000421897 457 ntBASIC20.2■□□□□ 0.82
RIPK4P57078 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC20.2■□□□□ 0.82
RIPK4P57078 AC012441.1-201ENST00000446669 685 ntBASIC20.2■□□□□ 0.82
RIPK4P57078 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RIPK4P57078 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC20.2■□□□□ 0.82
RIPK4P57078 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC20.2■□□□□ 0.82
RIPK4P57078 AC022137.2-201ENST00000503482 481 ntBASIC20.2■□□□□ 0.82
RIPK4P57078 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC20.2■□□□□ 0.82
RIPK4P57078 KSR1-207ENST00000578981 748 ntTSL 4 BASIC20.2■□□□□ 0.82
RIPK4P57078 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC20.2■□□□□ 0.82
RIPK4P57078 AL162274.1-201ENST00000617191 1098 ntBASIC20.2■□□□□ 0.82
RIPK4P57078 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC20.2■□□□□ 0.82
RIPK4P57078 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RIPK4P57078 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RIPK4P57078 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RIPK4P57078 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RIPK4P57078 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC20.2■□□□□ 0.82
RIPK4P57078 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RIPK4P57078 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RIPK4P57078 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RIPK4P57078 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RIPK4P57078 KRT8P44-201ENST00000441609 1350 ntBASIC20.2■□□□□ 0.82
RIPK4P57078 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RIPK4P57078 AL158070.2-201ENST00000623713 1621 ntBASIC20.2■□□□□ 0.82
RIPK4P57078 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RIPK4P57078 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC20.19■□□□□ 0.82
RIPK4P57078 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RIPK4P57078 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC20.19■□□□□ 0.82
RIPK4P57078 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RIPK4P57078 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
RIPK4P57078 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RIPK4P57078 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RIPK4P57078 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RIPK4P57078 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RIPK4P57078 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RIPK4P57078 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RIPK4P57078 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC20.19■□□□□ 0.82
RIPK4P57078 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC20.19■□□□□ 0.82
RIPK4P57078 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RIPK4P57078 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
RIPK4P57078 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RIPK4P57078 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RIPK4P57078 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RIPK4P57078 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RIPK4P57078 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC20.19■□□□□ 0.82
RIPK4P57078 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC20.19■□□□□ 0.82
RIPK4P57078 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC20.19■□□□□ 0.82
RIPK4P57078 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RIPK4P57078 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC20.19■□□□□ 0.82
RIPK4P57078 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC20.19■□□□□ 0.82
RIPK4P57078 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
RIPK4P57078 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC20.19■□□□□ 0.82
RIPK4P57078 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC20.19■□□□□ 0.82
RIPK4P57078 AC233724.13-201ENST00000598383 410 ntBASIC20.19■□□□□ 0.82
RIPK4P57078 AP005019.2-201ENST00000615104 511 ntBASIC20.19■□□□□ 0.82
RIPK4P57078 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms