Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.07□□□□□ -0.48
Sox18P43680 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox18P43680 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Sox18P43680 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sox18P43680 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.06□□□□□ -0.48
Sox18P43680 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Sox18P43680 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Sox18P43680 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC12.06□□□□□ -0.48
Sox18P43680 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.06□□□□□ -0.48
Sox18P43680 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.06□□□□□ -0.48
Sox18P43680 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.06□□□□□ -0.48
Sox18P43680 AY036118-201ENSMUST00000200021 923 ntBASIC12.06□□□□□ -0.48
Sox18P43680 Gm19287-201ENSMUST00000203190 358 ntBASIC12.06□□□□□ -0.48
Sox18P43680 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.06□□□□□ -0.48
Sox18P43680 Gm19187-201ENSMUST00000206781 892 ntBASIC12.06□□□□□ -0.48
Sox18P43680 AC158388.1-201ENSMUST00000225441 256 ntBASIC12.06□□□□□ -0.48
Sox18P43680 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC12.06□□□□□ -0.48
Sox18P43680 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sox18P43680 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.06□□□□□ -0.48
Sox18P43680 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.06□□□□□ -0.48
Sox18P43680 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Sox18P43680 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Sox18P43680 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Sox18P43680 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.06□□□□□ -0.48
Sox18P43680 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox18P43680 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox18P43680 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.05□□□□□ -0.48
Sox18P43680 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.05□□□□□ -0.48
Sox18P43680 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox18P43680 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox18P43680 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox18P43680 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox18P43680 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Sox18P43680 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox18P43680 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox18P43680 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox18P43680 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox18P43680 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox18P43680 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.05□□□□□ -0.48
Sox18P43680 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox18P43680 Gm23949-201ENSMUST00000104027 127 ntBASIC12.05□□□□□ -0.48
Sox18P43680 Gm25880-201ENSMUST00000104331 132 ntBASIC12.05□□□□□ -0.48
Sox18P43680 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox18P43680 Gm14058-201ENSMUST00000116082 735 ntBASIC12.05□□□□□ -0.48
Sox18P43680 Gm13035-201ENSMUST00000117496 342 ntBASIC12.05□□□□□ -0.48
Sox18P43680 Gm15515-201ENSMUST00000117827 822 ntBASIC12.05□□□□□ -0.48
Sox18P43680 Gm15711-201ENSMUST00000118889 535 ntBASIC12.05□□□□□ -0.48
Sox18P43680 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.05□□□□□ -0.48
Sox18P43680 Gm11941-201ENSMUST00000119904 610 ntBASIC12.05□□□□□ -0.48
Sox18P43680 Gm1866-201ENSMUST00000120701 477 ntBASIC12.05□□□□□ -0.48
Sox18P43680 Gm14832-201ENSMUST00000121289 322 ntBASIC12.05□□□□□ -0.48
Sox18P43680 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.05□□□□□ -0.48
Sox18P43680 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC12.05□□□□□ -0.48
Sox18P43680 Gm24845-201ENSMUST00000158034 109 ntBASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms