Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.55□□□□□ -0.56
Thbs1P35441 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.55□□□□□ -0.56
Thbs1P35441 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thbs1P35441 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thbs1P35441 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Thbs1P35441 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thbs1P35441 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thbs1P35441 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Thbs1P35441 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thbs1P35441 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Thbs1P35441 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thbs1P35441 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thbs1P35441 Daam2-202ENSMUST00000224595 1926 ntBASIC11.54□□□□□ -0.56
Thbs1P35441 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thbs1P35441 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thbs1P35441 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.54□□□□□ -0.56
Thbs1P35441 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Thbs1P35441 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Thbs1P35441 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thbs1P35441 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thbs1P35441 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thbs1P35441 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Thbs1P35441 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thbs1P35441 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thbs1P35441 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thbs1P35441 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Thbs1P35441 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thbs1P35441 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Thbs1P35441 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Thbs1P35441 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Thbs1P35441 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.54□□□□□ -0.56
Thbs1P35441 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.54□□□□□ -0.56
Thbs1P35441 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.54□□□□□ -0.56
Thbs1P35441 Gm11591-201ENSMUST00000120063 702 ntBASIC11.54□□□□□ -0.56
Thbs1P35441 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.54□□□□□ -0.56
Thbs1P35441 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.54□□□□□ -0.56
Thbs1P35441 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Thbs1P35441 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Thbs1P35441 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.54□□□□□ -0.56
Thbs1P35441 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.54□□□□□ -0.56
Thbs1P35441 Gm17420-201ENSMUST00000164753 153 ntBASIC11.54□□□□□ -0.56
Thbs1P35441 Gm25927-201ENSMUST00000175058 117 ntBASIC11.54□□□□□ -0.56
Thbs1P35441 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Thbs1P35441 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Thbs1P35441 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.54□□□□□ -0.56
Thbs1P35441 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.54□□□□□ -0.56
Thbs1P35441 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Thbs1P35441 Gm5904-201ENSMUST00000210286 865 ntBASIC11.54□□□□□ -0.56
Thbs1P35441 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Thbs1P35441 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Thbs1P35441 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.54□□□□□ -0.56
Thbs1P35441 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Thbs1P35441 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thbs1P35441 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Thbs1P35441 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thbs1P35441 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.54□□□□□ -0.56
Thbs1P35441 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thbs1P35441 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thbs1P35441 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thbs1P35441 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thbs1P35441 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thbs1P35441 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Thbs1P35441 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Thbs1P35441 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Thbs1P35441 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Thbs1P35441 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs1P35441 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs1P35441 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs1P35441 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs1P35441 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs1P35441 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs1P35441 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs1P35441 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs1P35441 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs1P35441 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.53□□□□□ -0.56
Thbs1P35441 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.53□□□□□ -0.56
Thbs1P35441 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.53□□□□□ -0.56
Thbs1P35441 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs1P35441 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs1P35441 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Thbs1P35441 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs1P35441 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs1P35441 Gm12502-201ENSMUST00000120197 444 ntBASIC11.53□□□□□ -0.56
Thbs1P35441 Gm13315-201ENSMUST00000120376 991 ntBASIC11.53□□□□□ -0.56
Thbs1P35441 Gm11597-201ENSMUST00000121423 964 ntBASIC11.53□□□□□ -0.56
Thbs1P35441 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs1P35441 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs1P35441 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.53□□□□□ -0.56
Thbs1P35441 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.53□□□□□ -0.56
Thbs1P35441 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs1P35441 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Thbs1P35441 Gm16379-201ENSMUST00000161469 348 ntBASIC11.53□□□□□ -0.56
Thbs1P35441 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.53□□□□□ -0.56
Thbs1P35441 Gm9022-201ENSMUST00000182482 992 ntBASIC11.53□□□□□ -0.56
Thbs1P35441 Gm8762-201ENSMUST00000193486 339 ntBASIC11.53□□□□□ -0.56
Thbs1P35441 Gm36982-201ENSMUST00000193796 1128 ntBASIC11.53□□□□□ -0.56
Thbs1P35441 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.53□□□□□ -0.56
Thbs1P35441 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.53□□□□□ -0.56
Thbs1P35441 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC11.53□□□□□ -0.56
Thbs1P35441 Gm5781-201ENSMUST00000219792 443 ntBASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms