Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CHD2O14647 ALG1L6P-201ENST00000515248 758 ntBASIC20.9■□□□□ 0.94
CHD2O14647 NEU3-207ENST00000534628 746 ntTSL 2 BASIC20.9■□□□□ 0.94
CHD2O14647 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC20.9■□□□□ 0.94
CHD2O14647 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC20.9■□□□□ 0.94
CHD2O14647 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC20.9■□□□□ 0.94
CHD2O14647 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC20.9■□□□□ 0.94
CHD2O14647 AL360270.3-201ENST00000609118 1348 ntBASIC20.9■□□□□ 0.94
CHD2O14647 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHD2O14647 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHD2O14647 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHD2O14647 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CHD2O14647 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHD2O14647 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHD2O14647 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CHD2O14647 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHD2O14647 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHD2O14647 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CHD2O14647 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHD2O14647 OR2R1P-201ENST00000441404 914 ntBASIC20.9■□□□□ 0.94
CHD2O14647 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC20.9■□□□□ 0.94
CHD2O14647 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC20.9■□□□□ 0.94
CHD2O14647 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC20.9■□□□□ 0.94
CHD2O14647 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC20.9■□□□□ 0.94
CHD2O14647 AL022334.2-201ENST00000610000 484 ntBASIC20.9■□□□□ 0.94
CHD2O14647 AC087392.5-201ENST00000612517 489 ntBASIC20.9■□□□□ 0.94
CHD2O14647 AC092299.1-201ENST00000632679 757 ntBASIC20.9■□□□□ 0.94
CHD2O14647 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHD2O14647 RAN-210ENST00000541630 1475 ntTSL 2 BASIC20.9■□□□□ 0.94
CHD2O14647 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHD2O14647 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC20.89■□□□□ 0.94
CHD2O14647 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.89■□□□□ 0.94
CHD2O14647 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHD2O14647 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC20.89■□□□□ 0.94
CHD2O14647 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CHD2O14647 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
CHD2O14647 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC20.89■□□□□ 0.93
CHD2O14647 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC20.89■□□□□ 0.93
CHD2O14647 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CHD2O14647 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC20.89■□□□□ 0.93
CHD2O14647 AC080080.1-201ENST00000625121 2420 ntBASIC20.89■□□□□ 0.93
CHD2O14647 CICP12-201ENST00000455801 843 ntBASIC20.89■□□□□ 0.93
CHD2O14647 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC20.89■□□□□ 0.93
CHD2O14647 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC20.89■□□□□ 0.93
CHD2O14647 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHD2O14647 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHD2O14647 NUDT4P2-201ENST00000578341 546 ntBASIC20.89■□□□□ 0.93
CHD2O14647 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC20.89■□□□□ 0.93
CHD2O14647 SIGLEC18P-201ENST00000602271 909 ntBASIC20.89■□□□□ 0.93
CHD2O14647 FO393412.1-201ENST00000619841 382 ntBASIC20.89■□□□□ 0.93
CHD2O14647 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC20.89■□□□□ 0.93
CHD2O14647 AL137783.1-201ENST00000623494 1896 ntBASIC20.89■□□□□ 0.93
CHD2O14647 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CHD2O14647 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.89■□□□□ 0.93
CHD2O14647 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.89■□□□□ 0.93
CHD2O14647 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC20.89■□□□□ 0.93
CHD2O14647 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHD2O14647 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHD2O14647 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHD2O14647 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC20.89■□□□□ 0.93
CHD2O14647 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC20.89■□□□□ 0.93
CHD2O14647 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHD2O14647 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHD2O14647 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CHD2O14647 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHD2O14647 SERF2-206ENST00000409291 807 ntTSL 3 BASIC20.88■□□□□ 0.93
CHD2O14647 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC20.88■□□□□ 0.93
CHD2O14647 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC20.88■□□□□ 0.93
CHD2O14647 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC20.88■□□□□ 0.93
CHD2O14647 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC20.88■□□□□ 0.93
CHD2O14647 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC20.88■□□□□ 0.93
CHD2O14647 AL118516.1-201ENST00000564152 670 ntBASIC20.88■□□□□ 0.93
CHD2O14647 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC20.88■□□□□ 0.93
CHD2O14647 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC20.88■□□□□ 0.93
CHD2O14647 MIR6769A-201ENST00000617340 73 ntBASIC20.88■□□□□ 0.93
CHD2O14647 AC138466.4-201ENST00000623965 852 ntBASIC20.88■□□□□ 0.93
CHD2O14647 AC138466.5-201ENST00000624002 808 ntBASIC20.88■□□□□ 0.93
CHD2O14647 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHD2O14647 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHD2O14647 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHD2O14647 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHD2O14647 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHD2O14647 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.88■□□□□ 0.93
CHD2O14647 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
CHD2O14647 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHD2O14647 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHD2O14647 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHD2O14647 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHD2O14647 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC20.88■□□□□ 0.93
CHD2O14647 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHD2O14647 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC20.88■□□□□ 0.93
CHD2O14647 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CHD2O14647 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC20.88■□□□□ 0.93
CHD2O14647 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
CHD2O14647 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD2O14647 PRORSD1P-202ENST00000563365 2154 ntBASIC20.87■□□□□ 0.93
CHD2O14647 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD2O14647 AC022211.2-201ENST00000585075 2527 ntBASIC20.87■□□□□ 0.93
CHD2O14647 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC20.87■□□□□ 0.93
CHD2O14647 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms