Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.2□□□□□ -0.3
CLCC1Q96S66 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
CLCC1Q96S66 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CLCC1Q96S66 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLCC1Q96S66 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CLCC1Q96S66 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
CLCC1Q96S66 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLCC1Q96S66 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLCC1Q96S66 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.2□□□□□ -0.3
CLCC1Q96S66 PMS2P4-201ENST00000412466 1052 ntBASIC13.2□□□□□ -0.3
CLCC1Q96S66 AC023274.1-201ENST00000418278 595 ntBASIC13.2□□□□□ -0.3
CLCC1Q96S66 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.2□□□□□ -0.3
CLCC1Q96S66 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLCC1Q96S66 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
CLCC1Q96S66 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.2□□□□□ -0.3
CLCC1Q96S66 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.2□□□□□ -0.3
CLCC1Q96S66 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.2□□□□□ -0.3
CLCC1Q96S66 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.2□□□□□ -0.3
CLCC1Q96S66 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CLCC1Q96S66 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.2□□□□□ -0.3
CLCC1Q96S66 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLCC1Q96S66 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
CLCC1Q96S66 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLCC1Q96S66 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
CLCC1Q96S66 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLCC1Q96S66 LINC01101-201ENST00000622953 1884 ntBASIC13.2□□□□□ -0.3
CLCC1Q96S66 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CLCC1Q96S66 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLCC1Q96S66 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLCC1Q96S66 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CLCC1Q96S66 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLCC1Q96S66 AC092919.2-201ENST00000623631 1645 ntBASIC13.2□□□□□ -0.3
CLCC1Q96S66 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.2□□□□□ -0.3
CLCC1Q96S66 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLCC1Q96S66 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLCC1Q96S66 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLCC1Q96S66 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLCC1Q96S66 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.2□□□□□ -0.3
CLCC1Q96S66 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
CLCC1Q96S66 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.2□□□□□ -0.3
CLCC1Q96S66 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLCC1Q96S66 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLCC1Q96S66 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLCC1Q96S66 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLCC1Q96S66 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
CLCC1Q96S66 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLCC1Q96S66 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLCC1Q96S66 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLCC1Q96S66 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLCC1Q96S66 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.19□□□□□ -0.3
CLCC1Q96S66 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.19□□□□□ -0.3
CLCC1Q96S66 AC005622.1-201ENST00000636801 1703 ntBASIC13.19□□□□□ -0.3
CLCC1Q96S66 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLCC1Q96S66 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLCC1Q96S66 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLCC1Q96S66 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.19□□□□□ -0.3
CLCC1Q96S66 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLCC1Q96S66 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CLCC1Q96S66 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLCC1Q96S66 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLCC1Q96S66 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLCC1Q96S66 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLCC1Q96S66 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLCC1Q96S66 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.19□□□□□ -0.3
CLCC1Q96S66 AP003680.1-201ENST00000598970 3660 ntBASIC13.19□□□□□ -0.3
CLCC1Q96S66 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLCC1Q96S66 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.19□□□□□ -0.3
CLCC1Q96S66 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.19□□□□□ -0.3
CLCC1Q96S66 AL022342.1-201ENST00000400363 863 ntBASIC13.19□□□□□ -0.3
CLCC1Q96S66 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.19□□□□□ -0.3
CLCC1Q96S66 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.19□□□□□ -0.3
CLCC1Q96S66 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLCC1Q96S66 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLCC1Q96S66 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.19□□□□□ -0.3
CLCC1Q96S66 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLCC1Q96S66 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CLCC1Q96S66 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.19□□□□□ -0.3
CLCC1Q96S66 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.19□□□□□ -0.3
CLCC1Q96S66 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CLCC1Q96S66 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.19□□□□□ -0.3
CLCC1Q96S66 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.19□□□□□ -0.3
CLCC1Q96S66 AC092865.6-201ENST00000642101 219 ntBASIC13.19□□□□□ -0.3
CLCC1Q96S66 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLCC1Q96S66 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLCC1Q96S66 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.19□□□□□ -0.3
CLCC1Q96S66 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.19□□□□□ -0.3
CLCC1Q96S66 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CLCC1Q96S66 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CLCC1Q96S66 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLCC1Q96S66 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CLCC1Q96S66 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CLCC1Q96S66 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLCC1Q96S66 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLCC1Q96S66 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
CLCC1Q96S66 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLCC1Q96S66 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.19□□□□□ -0.3
CLCC1Q96S66 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.19□□□□□ -0.3
CLCC1Q96S66 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLCC1Q96S66 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLCC1Q96S66 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms