Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.4□□□□□ -0.1
Smc1bQ920F6 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.4□□□□□ -0.1
Smc1bQ920F6 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc1bQ920F6 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc1bQ920F6 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc1bQ920F6 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.4□□□□□ -0.1
Smc1bQ920F6 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc1bQ920F6 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc1bQ920F6 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smc1bQ920F6 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.4□□□□□ -0.1
Smc1bQ920F6 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.4□□□□□ -0.1
Smc1bQ920F6 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.4□□□□□ -0.1
Smc1bQ920F6 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Smc1bQ920F6 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc1bQ920F6 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc1bQ920F6 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smc1bQ920F6 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Smc1bQ920F6 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smc1bQ920F6 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smc1bQ920F6 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smc1bQ920F6 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Smc1bQ920F6 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smc1bQ920F6 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smc1bQ920F6 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smc1bQ920F6 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smc1bQ920F6 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smc1bQ920F6 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smc1bQ920F6 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Smc1bQ920F6 Gm25700-201ENSMUST00000177693 110 ntBASIC14.39□□□□□ -0.11
Smc1bQ920F6 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smc1bQ920F6 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smc1bQ920F6 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smc1bQ920F6 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smc1bQ920F6 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smc1bQ920F6 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smc1bQ920F6 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.39□□□□□ -0.11
Smc1bQ920F6 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Smc1bQ920F6 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Smc1bQ920F6 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smc1bQ920F6 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.38□□□□□ -0.11
Smc1bQ920F6 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.38□□□□□ -0.11
Smc1bQ920F6 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.38□□□□□ -0.11
Smc1bQ920F6 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.38□□□□□ -0.11
Smc1bQ920F6 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Gm11978-201ENSMUST00000122315 466 ntBASIC14.38□□□□□ -0.11
Smc1bQ920F6 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Gm7593-201ENSMUST00000187246 644 ntBASIC14.38□□□□□ -0.11
Smc1bQ920F6 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.38□□□□□ -0.11
Smc1bQ920F6 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.38□□□□□ -0.11
Smc1bQ920F6 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.38□□□□□ -0.11
Smc1bQ920F6 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc1bQ920F6 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1bQ920F6 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1bQ920F6 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1bQ920F6 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.37□□□□□ -0.11
Smc1bQ920F6 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1bQ920F6 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms