Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Gm18934-201ENSMUST00000216671 1044 ntBASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Gm43937-201ENSMUST00000204640 3122 ntBASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Gm27430-201ENSMUST00000184585 107 ntBASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Gm44333-201ENSMUST00000197168 107 ntBASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 AC225888.1-201ENSMUST00000227184 728 ntBASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav3-3Q5R1C3 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
Trav3-3Q5R1C3 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav3-3Q5R1C3 Gm43999-201ENSMUST00000204286 2889 ntBASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms