Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 Gm18304-201ENSMUST00000189162 546 ntBASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 Gm18062-201ENSMUST00000208020 547 ntBASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 Gm18055-201ENSMUST00000208254 547 ntBASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf20Q5DTM8 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Gm6023-201ENSMUST00000118217 606 ntBASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Gm13342-201ENSMUST00000121055 207 ntBASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Rnf20Q5DTM8 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Rnf20Q5DTM8 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf20Q5DTM8 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.79□□□□□ -0.04
Rnf20Q5DTM8 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.79□□□□□ -0.04
Rnf20Q5DTM8 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf20Q5DTM8 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf20Q5DTM8 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf20Q5DTM8 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf20Q5DTM8 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Rnf20Q5DTM8 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf20Q5DTM8 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf20Q5DTM8 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Rnf20Q5DTM8 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf20Q5DTM8 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms